Mesude Bicak
Mesude Bicak
Senior Researcher in Bioinformatics, University of Oxford
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Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community
K Krampis, T Booth, B Chapman, B Tiwari, M Bicak, D Field, KE Nelson
BMC bioinformatics 13 (1), 42, 2012
The ocean sampling day consortium
A Kopf, M Bicak, R Kottmann, J Schnetzer, I Kostadinov, K Lehmann, ...
Gigascience 4 (1), s13742-015-0066-5, 2015
Modelling complex biological systems using an agent-based approach
M Holcombe, S Adra, M Bicak, S Chin, S Coakley, AI Graham, J Green, ...
Integrative Biology 4 (1), 53-64, 2012
The founding charter of the Genomic Observatories Network
N Davies, D Field, L Amaral-Zettler, MS Clark, J Deck, A Drummond, ...
GigaScience 3 (1), 2047-217X-3-2, 2014
Sequencing data: A genomic network to monitor Earth
N Davies, D Field, Genomic Observatories Network
Nature 481 (7380), 145-145, 2012
A call for an international network of genomic observatories (GOs)
N Davies, C Meyer, JA Gilbert, L Amaral-Zettler, J Deck, M Bicak, ...
GigaScience 1 (1), 2047-217X-1-5, 2012
Marine microbial biodiversity, bioinformatics and biotechnology (M2B3) data reporting and service standards
P Ten Hoopen, S Pesant, R Kottmann, A Kopf, M Bicak, S Claus, ...
Standards in Genomic Sciences 10 (1), 20, 2015
Genome-wide scan identifies role for AOX1 in prostate cancer survival
W Li, M Middha, M Bicak, DD Sjoberg, E Vertosick, A Dahlin, ...
European urology 74 (6), 710-719, 2018
Decentralized communication, trail connectivity and emergent benefits of ant pheromone trail networks
DE Jackson, M Bicak, M Holcombe
Memetic computing 3 (1), 25-32, 2011
Flame: A platform for high performance computing of complex systems, applied for three case studies
M Kiran, M Bicak, S Maleki-Dizaji, M Holcombe
Acta Physica Polonica. Series B, Proceedings Supplement 4 (2), 2011
The ocean sampling day consortium. GigaScience 4, 1–5
A Kopf, M Bicak, R Kottmann, J Schnetzer, I Kostadinov, K Lehmann, ...
Agent-Based Modelling of Decentralized Ant Behaviour using High Performance Computing
M Bicak
University of Sheffield, 2011
A paradigm for self-organisation: new inspiration from ant foraging trails
DE Jackson, M Bicak, M Holcombe
Fifth IEEE Workshop on Engineering of Autonomic and Autonomous Systems (EASE …, 2008
Ocean sampling day handbook
P ten Hoopen, G Cochrane, Micro B3 Consortium
Genetic signature of prostate cancer mouse models resistant to optimized hK2 targeted α-particle therapy
M Bicak, K Lückerath, T Kalidindi, ME Phelps, SE Strand, MJ Morris, ...
Proceedings of the National Academy of Sciences, 2020
Prostate cancer risk SNP rs10993994 is a trans-eQTL for SNHG11 mediated through MSMB
M Bicak, X Wang, X Gao, X Xu, RM Vaananen, P Taimen, HG Lilja, ...
Human Molecular Genetics, 2020
Clinicopathologic and Genomic Factors Associated With Oncologic Outcome in Patients With Stage III to IV Chromophobe Renal Cell Carcinoma
AT Beksac, M Bicak, I Paranjpe, DJ Paulucci, JP Sfakianos, KK Badani
Clinical genitourinary cancer 17 (2), e314-e322, 2019
Genetic signature of prostate cancer resistant to optimized hK2 targeted alpha-particle therapy
M Bicak, K Lückerath, T Kalidindi, SE Strand, M Morris, C Radu, ...
bioRxiv, 754036, 2019
Cooperation and conflict in microbial biofilms
M Kiran, S Adra, M Kiran, P McMinn, N Walkinshaw, S Adra, S Tao, ...
X-Machines for Agent-Based Modeling: FLAME Perspectives 5 (1), v-v, 2016
Report of the 14 th Genomic Standards Consortium Meeting, Oxford, UK, September 17–21, 2012
N Davies, D Field, L Amaral-Zettler, K Barker, M Bicak, S Bourlat, ...
Standards in Genomic Sciences 9 (3), 1236-1250, 2014
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