| Senescence-associated reprogramming promotes cancer stemness M Milanovic, DNY Fan, D Belenki, JHM Däbritz, Z Zhao, Y Yu, JR Dörr, ... Nature 553 (7686), 96-100, 2018 | 864 | 2018 |
| Spo11-accessory proteins link double-strand break sites to the chromosome axis in early meiotic recombination S Panizza, MA Mendoza, M Berlinger, L Huang, A Nicolas, K Shirahige, ... Cell 146 (3), 372-383, 2011 | 379 | 2011 |
| Transferring the concept of multinuclearity to ruthenium complexes for improvement of anticancer activity MG Mendoza-Ferri, CG Hartinger, MA Mendoza, M Groessl, AE Egger, ... Journal of medicinal chemistry 52 (4), 916-925, 2009 | 199 | 2009 |
| The inactive X chromosome is epigenetically unstable and transcriptionally labile in breast cancer R Chaligné, T Popova, MA Mendoza-Parra, MAM Saleem, D Gentien, ... Genome research 25 (4), 488-503, 2015 | 145 | 2015 |
| Single-tube linear DNA amplification (LinDA) for robust ChIP-seq P Shankaranarayanan, MA Mendoza-Parra, M Walia, L Wang, N Li, ... Nature methods 8 (7), 565-567, 2011 | 143 | 2011 |
| Statistical genomics: methods and protocols F Hahne, R Ivanek, E Mathé, S Davis Chapter visualizing genomic data using Gviz and Bioconductor. New York …, 2016 | 116 | 2016 |
| Dissecting the retinoid‐induced differentiation of F9 embryonal stem cells by integrative genomics MA Mendoza‐Parra, M Walia, M Sankar, H Gronemeyer Molecular systems biology 7 (1), 538, 2011 | 97 | 2011 |
| CBP and P300 regulate distinct gene networks required for human primary myoblast differentiation and muscle integrity L Fauquier, K Azzag, MAM Parra, A Quillien, M Boulet, S Diouf, G Carnac, ... Scientific reports 8 (1), 12629, 2018 | 55 | 2018 |
| A quality control system for profiles obtained by ChIP sequencing MA Mendoza-Parra, W Van Gool, MA Mohamed Saleem, DG Ceschin, ... Nucleic acids research 41 (21), e196-e196, 2013 | 47 | 2013 |
| Statistical Genomics E Mathé, S Davis, Mathé Springer New York, 2016 | 38 | 2016 |
| Single-tube linear DNA amplification for genome-wide studies using a few thousand cells P Shankaranarayanan, MA Mendoza-Parra, W Van Gool, LM Trindade, ... nature protocols 7 (2), 328-339, 2012 | 36 | 2012 |
| Reconstructed cell fate–regulatory programs in stem cells reveal hierarchies and key factors of neurogenesis MA Mendoza-Parra, V Malysheva, MAM Saleem, M Lieb, A Godel, ... Genome Research 26 (11), 1505-1519, 2016 | 30 | 2016 |
| The retinoids: biology, biochemistry, and disease P Dollé, K Niederreither John Wiley & Sons, 2015 | 30 | 2015 |
| Senescence‐secreted factors activate M yc and sensitize pretransformed cells to TRAIL‐induced apoptosis J Vjetrovic, P Shankaranarayanan, MA Mendoza‐Parra, H Gronemeyer Aging cell 13 (3), 487-496, 2014 | 28 | 2014 |
| Inferring biologically relevant molecular tissue substructures by agglomerative clustering of digitized spatial transcriptomes with multilayer J Moehlin, B Mollet, BM Colombo, MA Mendoza-Parra Cell Systems 12 (7), 694-705. e3, 2021 | 24 | 2021 |
| Reconstruction of gene regulatory networks reveals chromatin remodelers and key transcription factors in tumorigenesis V Malysheva, MA Mendoza-Parra, MAM Saleem, H Gronemeyer Genome medicine 8, 1-16, 2016 | 23 | 2016 |
| Genome-wide studies of nuclear receptors in cell fate decisions MA Mendoza-Parra, H Gronemeyer Seminars in cell & developmental biology 24 (10-12), 706-715, 2013 | 23 | 2013 |
| Characterising ChIP-seq binding patterns by model-based peak shape deconvolution MA Mendoza-Parra, M Nowicka, W Van Gool, H Gronemeyer BMC genomics 14, 1-10, 2013 | 22 | 2013 |
| CDYL2 epigenetically regulates MIR124 to control NF-κB/STAT3-dependent breast cancer cell plasticity M Siouda, AD Dujardin, L Barbollat-Boutrand, MA Mendoza-Parra, ... Iscience 23 (6), 2020 | 21 | 2020 |
| Modeling gene-regulatory networks to describe cell fate transitions and predict master regulators PE Cholley, J Moehlin, A Rohmer, V Zilliox, S Nicaise, H Gronemeyer, ... NPJ systems biology and applications 4 (1), 29, 2018 | 21 | 2018 |
