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Ivan Aksamentov
Ivan Aksamentov
Unknown affiliation
Verified email at unibas.ch
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Cited by
Cited by
Year
Nextclade: clade assignment, mutation calling and quality control for viral genomes
I Aksamentov, C Roemer, EB Hodcroft, RA Neher
Journal of open source software 6 (67), 3773, 2021
5782021
COVID-19 Scenarios: an interactive tool to explore the spread and associated morbidity and mortality of SARS-CoV-2
NB Noll, I Aksamentov, V Druelle, A Badenhorst, B Ronzani, G Jefferies, ...
MedRxiv, 2020.05. 05.20091363, 2020
662020
Deep neural networks predict remaining surgery duration from cholecystectomy videos
I Aksamentov, AP Twinanda, D Mutter, J Marescaux, N Padoy
Medical Image Computing and Computer-Assisted Intervention− MICCAI 2017 …, 2017
462017
Nextclade: clade assignment, mutation calling and quality control for viral genomes. J Open Source Softw 6: 3773
I Aksamentov, C Roemer, EB Hodcroft, RA Neher
Preprint at, 2021
272021
Nextclade: clade assignment, mutation calling and quality control for viral genomes. J Open Source Softw. 2021; 6: 3773
I Aksamentov, C Roemer, EB Hodcroft, RA Neher
17
Nextclade: clade assignment, mutation calling and quality control for viral genomes. JOSS 6: 3773
I Aksamentov, C Roemer, EB Hodcroft, RA Neher
102021
Clade assignment, mutation calling and quality control for viral genomes., 2021, 6
I Aksamentov, C Roemer, EB Hodcroft, RAN Nextclade
DOI: https://doi. org/10.21105/joss 3773, 3773, 0
10
Nextclade: clade assignment, mutation calling and quality control for viral genomes. J Open Source Softw. 2021; 6 (67): 3773
I Aksamentov, C Roemer, EB Hodcroft, RA Neher
10
COVID-19 Scenarios: an interactive tool to explore the spread and associated morbidity and mortality of SARS-CoV-2. medRxiv. 2020
NB Noll, I Aksamentov, V Druelle, A Badenhorst, B Ronzani, G Jefferies, ...
Google Scholar, 0
10
COVID-19 scenarios
R Neher, I Aksamentov, N Noll, H Albert, R Dyrdak
Accessed, 2020
82020
Nextclade
I Aksamentov, R Neher
Viral Genome Clade Assignment, Mutation Calling, and Sequence Quality Checks …, 2020
82020
Nextclade: clade assignment, mutation calling and quality control for viral genomes. J. Open Source Softw. 6 (67), 3773
I Aksamentov, C Roemer, EB Hodcroft, RA Neher
62021
Nextclade: clade assignment, mutation calling and quality control for viral genomes. Zenodo 2021
I Aksamentov, C Roemer, EB Hodcroft, RA Neher
6
Nextclade: Clade assignment, mutation calling and
I Aksamentov, C Roemer, EB Hodcroft, RA Neher
12021
COVID-19 Scenarios: an interactive tool to explore the spread and associated morbidity and mortality of SARS-CoV-2 (preprint)
NB Noll, I Aksamentov, V Druelle, A Badenhorst, B Ronzani, G Jefferies, ...
12020
Leveraging tools from Nextstrain for bespoke phylogenetic analysis of viral pathogen epidemics
BI Potter, J Huddleston, C Roemer, E Harkins, I Aksamentov, J Hadfield, ...
Mathematical and Computational Evolutionary Biology, Location: Chateau d'Oex …, 2023
2023
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