Suivre
Seren Soner
Seren Soner
PhD student at Computer Engineering, Bogazici University
Adresse e-mail validée de boun.edu.tr
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Community-wide assessment of protein-interface modeling suggests improvements to design methodology
SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ...
Journal of Molecular Biology, 2011
1562011
DNABINDPROT: fluctuation-based predictor of DNA-binding residues within a network of interacting residues
P Ozbek, S Soner, B Erman, T Haliloglu
Nucleic acids research 38 (suppl_2), W417-W423, 2010
592010
Integer programming based heterogeneous cpu–gpu cluster schedulers for slurm resource manager
S Soner, C Özturan
Journal of computer and system sciences 81 (1), 38-56, 2015
382015
Hot spots in a network of functional sites
P Ozbek, S Soner, T Haliloglu
PLoS One 8 (9), e74320, 2013
352013
DynaFace: discrimination between obligatory and non-obligatory protein-protein interactions based on the complex’s dynamics
S Soner, P Ozbek, JI Garzon, N Ben-Tal, T Haliloglu
PLoS Computational Biology 11 (10), e1004461, 2015
92015
Parallel mesh generation, migration and partitioning for the Elmer application
Y Yılmaz, C Özturan, O Tosun, AH Özer, S Soner
Tech. Rep., PREMA-Partnership for Advanced Computing in Europe, 2010
92010
Generating multibillion element unstructured meshes on distributed memory parallel machines
S Soner, C Ozturan
Scientific Programming 2015, 8-8, 2015
72015
Experiences with parallel multi-threaded network maximum flow algorithm
S Soner, C Ozturan
Technical report, PRACE, 2013
72013
An auction based slurm scheduler for heterogeneous supercomputers and its comparative performance study
S Soner, C Ozturan
Technical report, PRACE, 2013. http://www. prace-project. eu/IMG/pdf …, 2013
62013
Extending SLURM with Support for GPU Ranges
S Soner, C Ozturan, I Karac
PRACE, 2013
42013
A new auction‐based scheduler for heterogeneous systems with moldable generic resources support
S Soner, C Ozturan
Concurrency and Computation: Practice and Experience 28 (8), 2341-2352, 2016
32016
Topologically aware job scheduling for SLURM
S Soner, C Ozturan
Tech. Rep., 2014.[Online]. Available: http://www. prace-ri. eu/IMG/pdf/WP180 …, 2014
32014
DynaFace: Discrimination between Obligatory and Non-obligatory Protein-Protein Interactions Based on the Complex’s Dynamics
T Haliloglu, N Ben-Tal, J Garzon, P Ozbek, S Soner
22015
Job scheduling for heterogeneous supercomputers
S Soner
Fen Bilimleri Enstitüsü, 2016
2016
Generating Massive Unstructured Meshes for OpenFOAM
S Soner, C Ozturan
PRACE, 2014
2014
Poster: co-allocation based scheduling for parallel systems
S Soner, C Özturan, O Tosun
Proceedings of the 2011 companion on High Performance Computing Networking …, 2011
2011
Study of protein-protein interfaces using Gaussian network model
S Soner
Fen Bilimleri Enstitüsü, 2009
2009
Co-Allocation Based Scheduling For Parallel Systems
S Soner, C Özturan, O Tosun
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