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Zhiqun Xie
Zhiqun Xie
Computational Biologist, UT Southwestern Medical Center
Verified email at utsouthwestern.edu - Homepage
Title
Cited by
Cited by
Year
ISEScan: automated identification of insertion sequence elements in prokaryotic genomes
Z Xie, H Tang
Bioinformatics 33 (21), 3340-3347, 2017
2122017
An empirical approach leveraging tumorgrafts to dissect the tumor microenvironment in renal cell carcinoma identifies missing link to prognostic inflammatory factors
T Wang, R Lu, P Kapur, BS Jaiswal, R Hannan, Z Zhang, I Pedrosa, ...
Cancer discovery 8 (9), 1142-1155, 2018
1502018
HIF-2 complex dissociation, target inhibition, and acquired resistance with PT2385, a first-in-class HIF-2 inhibitor, in patients with clear cell renal cell carcinoma
KD Courtney, Y Ma, A Diaz de Leon, A Christie, Z Xie, L Woolford, ...
Clinical Cancer Research 26 (4), 793-803, 2020
1412020
Pancreatic tropism of metastatic renal cell carcinoma
N Singla, Z Xie, Z Zhang, M Gao, Q Yousuf, O Onabolu, T McKenzie, ...
JCI insight 5 (7), 2020
632020
Tumor neoantigenicity assessment with CSiN score incorporates clonality and immunogenicity to predict immunotherapy outcomes
T Lu, S Wang, L Xu, Q Zhou, N Singla, J Gao, S Manna, L Pop, Z Xie, ...
Science immunology 5 (44), eaaz3199, 2020
442020
Ectopic JAK–STAT activation enables the transition to a stem-like and multilineage state conferring AR-targeted therapy resistance
S Deng, C Wang, Y Wang, Y Xu, X Li, NA Johnson, A Mukherji, UG Lo, ...
Nature Cancer 3 (9), 1071-1087, 2022
432022
Protein sumoylation sites prediction based on two-stage feature selection
L Lu, XH Shi, SJ Li, ZQ Xie, YL Feng, WC Lu, YX Li, H Li, YD Cai
Molecular diversity 14, 81-86, 2010
362010
Determinants of renal cell carcinoma invasion and metastatic competence
K Kim, Q Zhou, A Christie, C Stevens, Y Ma, O Onabolu, S Chintalapati, ...
Nature communications 12 (1), 5760, 2021
312021
Monoclonal antibodies assisting refolding of firefly luciferase
Q Xu, Z Xie, J Ding, SX Lin, G Xu
Protein science 13 (7), 1851-1858, 2004
152004
OPMSP: A computational method integrating protein interaction and sequence information for the identification of novel putative oncogenes
L Chen, B Wang, SP Wang, J Yang, J Hu, ZQ Xie, Y Wang, T Huang, ...
Protein and Peptide Letters 23 (12), 1081-1094, 2016
132016
Functional analysis of the distal region of the third intracellular loop of PROKR2
XT Zhou, DN Chen, ZQ Xie, Z Peng, KD Xia, HD Liu, W Liu, B Su, JD Li
Biochemical and Biophysical Research Communications 439 (1), 12-17, 2013
132013
Loss of SYNCRIP unleashes APOBEC-driven mutagenesis, tumor heterogeneity, and AR-targeted therapy resistance in prostate cancer
X Li, Y Wang, S Deng, G Zhu, C Wang, NA Johnson, Z Zhang, CR Tirado, ...
Cancer cell 41 (8), 1427-1449. e12, 2023
102023
Association and activation of fructose 1, 6-bisphosphase during unfolding and refolding: spectroscopic and enzymatic studies
C Yuan, Z Xie, F Zhang, G Xu
Journal of Protein Chemistry 20, 39-47, 2001
72001
A method for delineation of domains in proteins based on refolding free energy--application to continuous and discontinuous domains
XGJ Xie ZQ
Sheng wu hua xue yu Sheng wu wu li xue bao Acta Biochimica et Biophysica …, 2003
5*2003
Delineation of Continuous Domains in Proteins by Differences of Free Energy
GJX ZQ Xie, DF Ding
Sheng wu hua xue yu Sheng wu wu li xue bao Acta Biochimica et Biophysica …, 2001
5*2001
Expression and Characterization of a Variant of TACI (CRD2-shortTACIFc) in Pichia pastoris
R Wang, S Zhou, X Peng, XW Zhou, ZQ Xie, Y Wang, W Mo, M Yu
Protein and Peptide Letters 19 (3), 315-325, 2012
22012
The Methods and Tools for Mobile Genetic Element Detection and Their Application to Systems Medicine
Z Xie
Systems Medicine: Integrative, Qualitative and Computational Approaches 1 …, 2020
12020
Unraveling the molecular profile underpinning pancreatic tropisms in metastatic clear cell renal cell carcinoma.
N Singla, O Onabolu, L Woolford, C Stevens, V Tcheuyap, T McKenzie, ...
Journal of Clinical Oncology 37 (15_suppl), e16096-e16096, 2019
12019
Comprehensive molecular and genomic characterization of pancreatic tropism in metastatic renal cell carcinoma.
N Singla, J Choi, O Onabolu, L Woolford, C Stevens, V Tcheuyap, ...
Journal of Clinical Oncology 37 (7_suppl), 633-633, 2019
12019
Conformational changes playing an important role in promiscuous protein functions
A del Sol, J Arvesú, Z Xie
Automated Function Prediction-Special Interest Group (AFP-SIG) at the …, 2005
2005
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Articles 1–20