Antonio Jimeno Yepes
Antonio Jimeno Yepes
IBM Research
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Findings of the 2016 conference on machine translation
O Bojar, R Chatterjee, C Federmann, Y Graham, B Haddow, M Huck, ...
Proceedings of the First Conference on Machine Translation: Volume 2, Shared …, 2016
Text processing through Web services: calling Whatizit
D Rebholz-Schuhmann, M Arregui, S Gaudan, H Kirsch, A Jimeno-Yepes
Bioinformatics 24 (2), 296-298, 2008
Assessment of disease named entity recognition on a corpus of annotated sentences
A Jimeno-Yepes, E Jimenez-Ruiz, V Lee, S Gaudan, R Berlanga, ...
BMC bioinformatics 9 (Suppl 3), S3, 2008
CALBC silver standard corpus
D Rebholz-Schuhmann, A Jimeno-Yepes, EM Van Mulligen, N Kang, ...
J Bioinform Comput Biol 8 (1), 163-79, 2010
Ontology refinement for improved information retrieval
A Jimeno-Yepes, R Berlanga-Llavori, D Rebholz-Schuhmann
Information Processing & Management 46 (4), 426-435, 2010
Exploiting MeSH indexing in MEDLINE to generate a data set for word sense disambiguation
A Jimeno-Yepes, B McInnes, A Aronson
BMC bioinformatics 12 (1), 223, 2011
The NLM Medical Text Indexer System for Indexing Biomedical Literature
JG Mork, AJ Jimeno Yepes, AR Aronson
BioASQ, 2013
Decoding EEG and LFP signals using deep learning: heading TrueNorth
E Nurse, BS Mashford, AJ Yepes, I Kiral-Kornek, S Harrer, DR Freestone
Proceedings of the ACM International Conference on Computing Frontiers, 259-266, 2016
Assessment of NER solutions against the first and second CALBC Silver Standard Corpus
D Rebholz-Schuhmann, A Jimeno-Yepes, C Li, S Kafkas, I Lewin, N Kang, ...
Journal of Biomedical Semantics 2 (Suppl 5), S11, 2011
Knowledge-based biomedical word sense disambiguation: comparison of approaches
A Jimeno-Yepes, A Aronson
BMC bioinformatics 11 (1), 569, 2010
Annotating the biomedical literature for the human variome
K Verspoor, A Jimeno Yepes, L Cavedon, T McIntosh, A Herten-Crabb, ...
Database 2013, 2013
Data-poor categorization and passage retrieval for gene ontology annotation in Swiss-Prot
F Ehrler, A Geissbühler, A Jimeno-Yepes, P Ruch
BMC bioinformatics 6 (Suppl 1), S23, 2005
Report on the TREC 2006 Experiment: Genomics Track
P Ruch, A Jimeno Yepes, F Ehrler, J Gobeill, I Tbahriti
TREC, 2006
Reuse of terminological resources for efficient ontological engineering in Life Sciences
A Jimeno-Yepes, E Jiménez-Ruiz, R Berlanga-Llavori, ...
BMC bioinformatics 10 (Suppl 10), S4, 2009
Combining evidence, specificity, and proximity towards the normalization of gene ontology terms in text
S Gaudan, A Jimeno-Yepes, V Lee, D Rebholz-Schuhmann
EURASIP Journal on Bioinformatics and Systems Biology, 4, 2008
A one-size-fits-all indexing method does not exist: automatic selection based on meta-learning
A Jimeno-Yepes, JG Mork, D Demner-Fushman, AR Aronson
Journal of Computing Science and Engineering 6 (2), 151-160, 2012
Named Entity Recognition with stack residual LSTM and trainable bias decoding
Q Tran, A MacKinlay, A Jimeno Yepes
International Joint Conference in Natural Language Processing, 2017
GeneRIF indexing: sentence selection based on machine learning
AJ Jimeno-Yepes, JC Sticco, JG Mork, AR Aronson
BMC bioinformatics 14 (1), 171, 2013
Word embeddings and recurrent neural networks based on Long-Short Term Memory nodes in supervised biomedical word sense disambiguation
A Jimeno Yepes
Journal of Biomedical Informatics 73, 137-147, 2017
A Knowledge-Based Approach to Medical Records Retrieval.
D Demner-Fushman, S Abhyankar, A Jimeno-Yepes, RF Loane, B Rance, ...
TREC, 2011
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