Jean Cury
Jean Cury
Affiliation inconnue
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Identification of protein secretion systems in bacterial genomes
SS Abby, J Cury, J Guglielmini, B Néron, M Touchon, EPC Rocha
Scientific reports 6 (1), 23080, 2016
The genomic diversification of the whole Acinetobacter genus: origins, mechanisms, and consequences
M Touchon, J Cury, EJ Yoon, L Krizova, GC Cerqueira, C Murphy, ...
Genome biology and evolution 6 (10), 2866-2882, 2014
Identification and analysis of integrons and cassette arrays in bacterial genomes
J Cury, T Jové, M Touchon, B Néron, EPC Rocha
Nucleic acids research 44 (10), 4539-4550, 2016
Systematic and quantitative view of the antiviral arsenal of prokaryotes
F Tesson, A Hervé, E Mordret, M Touchon, C D’humières, J Cury, ...
Nature communications 13 (1), 2561, 2022
The chromosomal organization of horizontal gene transfer in bacteria
PH Oliveira, M Touchon, J Cury, EPC Rocha
Nature communications 8 (1), 841, 2017
Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain
A Perrin, E Larsonneur, AC Nicholson, DJ Edwards, KM Gundlach, ...
Nature communications 8 (1), 15483, 2017
Integrative and conjugative elements and their hosts: composition, distribution and organization
J Cury, M Touchon, EPC Rocha
Nucleic acids research 45 (15), 8943-8956, 2017
IntegronFinder 2.0: identification and analysis of integrons across bacteria, with a focus on antibiotic resistance in Klebsiella
B Néron, E Littner, M Haudiquet, A Perrin, J Cury, EPC Rocha
Microorganisms 10 (4), 700, 2022
Deep learning for population size history inference: Design, comparison and combination with approximate Bayesian computation
T Sanchez, J Cury, G Charpiat, F Jay
Molecular Ecology Resources 21 (8), 2645-2660, 2021
Host range and genetic plasticity explain the co-existence of integrative and extrachromosomal mobile genetic elements
J Cury, PH Oliveira, F de la Cruz, EPC Rocha
Molecular biology and evolution 35 (9), 2230–2239, 2018
Identifying Conjugative Plasmids and Integrative Conjugative Elements with CONJscan
J Cury, SS Abby, O Doppelt-Azeroual, B Néron, EPC Rocha
Horizontal Gene Transfer, 265-283, 2020
A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach
C d’Humières, M Touchon, S Dion, J Cury, A Ghozlane, M Garcia-Garcera, ...
Scientific Reports 9 (1), 11331, 2019
Differences in integron cassette excision dynamics shape a trade-off between evolvability and genetic capacitance
C Loot, A Nivina, J Cury, JA Escudero, M Ducos-Galand, D Bikard, ...
MBio 8 (2), 10.1128/mbio. 02296-16, 2017
Intracellular positioning systems limit the entropic eviction of secondary replicons toward the nucleoid edges in bacterial cells
C Planchenault, MC Pons, C Schiavon, P Siguier, J Rech, C Guynet, ...
Journal of molecular biology 432 (3), 745-761, 2020
Structure-specific DNA recombination sites: Design, validation, and machine learning–based refinement
A Nivina, MS Grieb, C Loot, D Bikard, J Cury, L Shehata, J Bernardes, ...
Science advances 6 (30), eaay2922, 2020
Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations
ME Lauterbur, MIA Cavassim, AL Gladstein, G Gower, NS Pope, ...
Elife 12, RP84874, 2023
Conservation of antiviral systems across domains of life reveals novel immune mechanisms in humans
J Cury, E Mordret, VH Trejo, F Tesson, G Ofir, EZ Poirier, A Bernheim
bioRxiv, 2022.12. 12.520048, 2022
Simulation of bacterial populations with SLiM
J Cury, BC Haller, G Achaz, F Jay
Peer community Journal 2 (e7), 2022
dnadna: a deep learning framework for population genetics inference
T Sanchez, EM Bray, P Jobic, J Guez, AC Letournel, G Charpiat, J Cury, ...
Bioinformatics 39 (1), btac765, 2023
A descriptive study of IgG4-related disease in children and young adults
B de Sainte Marie, M Ebbo, A Grados, V Rebours, H Reumaux, ...
Autoimmunity reviews 21 (4), 103035, 2022
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