Olivier Poirion, Ph.D

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Lana GarmireUniversity of MichiganAdresse e-mail validée de med.umich.edu
Sebastian PreisslInstitute of Experimental and Clinical Pharmacology and Toxicology, University of FreiburgAdresse e-mail validée de pharmakol.uni-freiburg.de
Xiaomeng HouUniversity of California, San DiegoAdresse e-mail validée de ucsd.edu
Xun ZhuSt. Jude Children's Research HospitalAdresse e-mail validée de stjude.org
Bing Ren, Ph.D.University of California, San DiegoAdresse e-mail validée de ucsd.edu
Kumardeep ChaudharyCSIR-Institute of Genomics & Integrative Biology (IGIB)Adresse e-mail validée de igib.res.in
Liangqun LuUniversity of MemphisAdresse e-mail validée de memphis.edu
Sijia HuangBioinformatician, University of PennsylvaniaAdresse e-mail validée de pennmedicine.upenn.edu
Kai ZhangWestlake UniversityAdresse e-mail validée de westlake.edu.cn
Kyle Jeffrie GaultonWinkler Endowed Chair in Type 1 Diabetes; Associate Professor of Pediatrics, UCSDAdresse e-mail validée de ucsd.edu
Joshua ChiouPfizerAdresse e-mail validée de pfizer.com
Yang Eric LiAssistant Professor, Washington University in St. LouisAdresse e-mail validée de wustl.edu
James D. HockerMD/PhD Student | Bing Ren Laboratory | University of California San DiegoAdresse e-mail validée de ucsd.edu
Breck YunitsUniversity of Hawaii Cancer CenterAdresse e-mail validée de hawaii.edu
Cédric ARISDAKESSIANUniversity of Hawaii at ManoaAdresse e-mail validée de hawaii.edu
Guillaume BernardPostdoctoral Fellow, Institut de Biologie de L’Ecole Normale Supérieure (IBENS)Adresse e-mail validée de bio.ens.psl.eu
Mark A. RaganInstitute for Molecular Bioscience, The University of QueenslandAdresse e-mail validée de uq.edu.au
Benedicte LafayCNRSAdresse e-mail validée de univ-lyon1.fr

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Olivier Poirion, Ph.D

The Jackson Laboratory

Adresse e-mail validée de jax.org - Page d'accueil

Bioinformatics Genomics Machine-learning


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
Deep learning–based multi-omics integration robustly predicts survival in liver cancer K Chaudhary, OB Poirion, L Lu, LX Garmire Clinical Cancer Research 24 (6), 1248-1259, 2018	837	2018
Comparative cellular analysis of motor cortex in human, marmoset and mouse TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ... Nature 598 (7879), 111-119, 2021	384	2021
Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics C Muus, MD Luecken, G Eraslan, L Sikkema, A Waghray, G Heimberg, ... Nature medicine 27 (3), 546-559, 2021	298	2021
A multimodal cell census and atlas of the mammalian primary motor cortex Principal manuscript editors, Analysis coordination, ... Nature 598 (7879), 86-102, 2021	263	2021
Integrated analyses of single-cell atlases reveal age, gender, and smoking status associations with cell type-specific expression of mediators of SARS-CoV-2 viral entry and … C Muus, MD Luecken, G Eraslan, A Waghray, G Heimberg, L Sikkema, ... BioRxiv, 2020.04. 19.049254, 2020	255	2020
DeepImpute: an accurate, fast, and scalable deep neural network method to impute single-cell RNA-seq data C Arisdakessian, O Poirion, B Yunits, X Zhu, LX Garmire Genome biology 20, 1-14, 2019	236	2019
A single-cell atlas of chromatin accessibility in the human genome K Zhang, JD Hocker, M Miller, X Hou, J Chiou, OB Poirion, Y Qiu, YE Li, ... Cell 184 (24), 5985-6001. e19, 2021	203	2021
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ... Nature 598 (7879), 103-110, 2021	194	2021
DNA methylation atlas of the mouse brain at single-cell resolution H Liu, J Zhou, W Tian, C Luo, A Bartlett, A Aldridge, J Lucero, JK Osteen, ... Nature 598 (7879), 120-128, 2021	160	2021
Single-cell multiomic profiling of human lungs reveals cell-type-specific and age-dynamic control of SARS-CoV2 host genes A Wang, J Chiou, OB Poirion, J Buchanan, MJ Valdez, JM Verheyden, ... Elife 9, e62522, 2020	137	2020
Single-cell transcriptomics bioinformatics and computational challenges OB Poirion, X Zhu, T Ching, L Garmire Frontiers in genetics 7, 207977, 2016	127	2016
An atlas of gene regulatory elements in adult mouse cerebrum YE Li, S Preissl, X Hou, Z Zhang, K Zhang, Y Qiu, OB Poirion, B Li, ... Nature 598 (7879), 129-136, 2021	121	2021
DeepProg: an ensemble of deep-learning and machine-learning models for prognosis prediction using multi-omics data OB Poirion, Z Jing, K Chaudhary, S Huang, LX Garmire Genome medicine 13, 1-15, 2021	116	2021
Inferring phylogenies of evolving sequences without multiple sequence alignment CX Chan, G Bernard, O Poirion, JM Hogan, MA Ragan Scientific reports 4 (1), 6504, 2014	85	2014
Single-cell chromatin analysis of mammary gland development reveals cell-state transcriptional regulators and lineage relationships CY Chung, Z Ma, C Dravis, S Preissl, O Poirion, G Luna, X Hou, ... Cell reports 29 (2), 495-510. e6, 2019	75	2019
Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ... BioRxiv, 2020.03. 31.016972, 2020	73	2020
Using single-cell multiple omics approaches to resolve tumor heterogeneity MA Ortega, O Poirion, X Zhu, S Huang, TK Wolfgruber, R Sebra, ... Clinical and translational medicine 6, 1-16, 2017	73	2017
Cardiac cell type–specific gene regulatory programs and disease risk association JD Hocker, OB Poirion, F Zhu, J Buchanan, K Zhang, J Chiou, TM Wang, ... Science advances 7 (20), eabf1444, 2021	71	2021
Single-cell chromatin accessibility maps reveal regulatory programs driving early mouse organogenesis B Pijuan-Sala, NK Wilson, J Xia, X Hou, RL Hannah, S Kinston, ... Nature cell biology 22 (4), 487-497, 2020	62	2020
An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types Z Yao, H Liu, F Xie, S Fischer, AS Booeshaghi, RS Adkins, AI Aldridge, ... Biorxiv, 2020.02. 29.970558, 2020	62	2020

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