Bryan Brancotte
Bryan Brancotte
Institut Pasteur – Hub de Bioinformatique et Biostatistique – Département Biologie Computationnelle
Adresse e-mail validée de pasteur.fr
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Similarity search for scientific workflows
J Starlinger, B Brancotte, S Cohen-Boulakia, U Leser
482014
Rank aggregation with ties: Experiments and analysis
B Brancotte, B Yang, G Blin, S Cohen-Boulakia, A Denise, S Hamel
262015
Gene List significance at-a-glance with GeneValorization
B Brancotte, A Biton, I Bernard-Pierrot, F Radvanyi, F Reyal, ...
Bioinformatics 27 (8), 1187-1189, 2011
122011
Conqur-bio: Consensus ranking with query reformulation for biological data
B Brancotte, B Rance, A Denise, S Cohen-Boulakia
International Conference on Data Integration in the Life Sciences, 128-142, 2014
72014
Community curation of bioinformatics software and data resources
J Ison, H Ménager, B Brancotte, E Jaaniso, A Salumets, T Raček, ...
Briefings in bioinformatics 21 (5), 1697-1705, 2020
62020
A reusable tree-based web-visualization to browse EDAM ontology, and contribute to it.
B Brancotte, C Blanchet, H Ménager
Journal of Open Source Software 3 (27), 698, 2018
22018
Agrégation de classements avec égalités: algorithmes, guides à l'utilisateur et applications aux données biologiques
B Brancotte
Paris 11, 2015
12015
Reliability-aware and graph-based approach for rank aggregation of biological data
P Andrieu, B Brancotte, L Bulteau, S Cohen-Boulakia, A Denise, A Pierrot, ...
2019 15th International Conference on eScience (eScience), 136-145, 2019
2019
Redesign of iPPI-DB, a database for modulators of Protein-Protein Interactions
R Torchet, A Moine-Franel, H Borges, B Brancotte, O Doppelt-Azeroual, ...
JOBIM (Journées Ouvertes Biologie, Informatique et Mathématiques), 2019
2019
Bioconvert: a collaborative bioinformatics format converter library
T Cokelaer, A Biton, B Brancotte, Y Dufresne, KH Hillion, E Kornobis, ...
F1000Research 7, 2018
2018
Insyght: Analyse evolutionary conserved CDS, orthologs, syntenies, pan-genome, fusion, etc., for your bacteria of interest
T Lacroix, V Loux, J Lorenzo, B Brancotte, C Blanchet, JF Gibrat
Annual Research in Computational Molecular Biology (RECOMB), 2018
2018
Multi-Cloud deployment for microbial genomes analysis
J Lorenzo, B Brancotte, T Lacroix, M Bedri, JF Gibrat, C Blanchet
2017
Computing cluster with virtual machines in bioinformatics
J Lorenzo, S Perrin, AS Ngaïlo, B Brancotte, M Bedri, C Blanchet, ...
F1000Research 6, 2017
2017
Cloud-based automated deployment of applications and infrastructures to provide turnkey appliances for reusable bioinformatic applications
S Perrin, J Lorenzo, B Brancotte, JF Gibrat, C Blanchet
F1000Research 6, 2017
2017
Interrogation de bases de données biologiques publiques par reformulation de requêtes et classement des résultats avec ConQuR-Bio
B Brancotte, B Rance, A Denise, S Cohen-Boulakia
2015
DevOps bioinformatics services with Docker, GitLab CI, and Kubernetes
B Brancotte, T Menard, H Menager
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