Yong Lu
Yong Lu
Harvard Medical School
Verified email at cs.cmu.edu
Cited by
Cited by
Genome-wide identification of microRNAs regulating cholesterol and triglyceride homeostasis
A Wagschal, SH Najafi-Shoushtari, L Wang, L Goedeke, S Sinha, ...
Nature medicine 21 (11), 1290-1297, 2015
Genome-wide transcriptional analysis of the human cell cycle identifies genes differentially regulated in normal and cancer cells
Z Bar-Joseph, Z Siegfried, M Brandeis, B Brors, Y Lu, R Eils, BD Dynlacht, ...
Proceedings of the National Academy of Sciences 105 (3), 955-960, 2008
Cross species analysis of microarray expression data
Y Lu, P Huggins, Z Bar-Joseph
Bioinformatics 25 (12), 1476-1483, 2009
A probabilistic generative model for GO enrichment analysis
Y Lu, R Rosenfeld, I Simon, GJ Nau, Z Bar-Joseph
Nucleic acids research 36 (17), e109-e109, 2008
Epstein–Barr virus nuclear antigen leader protein localizes to promoters and enhancers with cell transcription factors and EBNA2
D Portal, H Zhou, B Zhao, PV Kharchenko, E Lowry, L Wong, ...
Proceedings of the National Academy of Sciences 110 (46), 18537-18542, 2013
Learning Temporal Causal Graphs for Relational Time-Series Analysis
Y Liu, A Niculescu-Mizil, A Lozano
International Conference on Machine Learning, 2010
The tandem inversion duplication in Salmonella enterica: selection drives unstable precursors to final mutation types
E Kugelberg, E Kofoid, DI Andersson, Y Lu, J Mellor, FP Roth, JR Roth
Genetics 185 (1), 65, 2010
Broad immune activation underlies shared set point signatures for vaccine responsiveness in healthy individuals and disease activity in patients with lupus
Y Kotliarov, R Sparks, AJ Martins, MP Mulè, Y Lu, M Goswami, L Kardava, ...
Nature medicine 26 (4), 618-629, 2020
Budding Yeast SSD1-V Regulates Transcript Levels of Many Longevity Genes and Extends Chronological Life Span in Purified Quiescent Cells
L Li, Y Lu, LX Qin, Z Bar-Joseph, M Werner-Washburne, LL Breeden
Molecular biology of the cell 20 (17), 3851-3864, 2009
Combined analysis reveals a core set of cycling genes
Y Lu, S Mahony, PV Benos, R Rosenfeld, I Simon, LL Breeden, ...
Genome biology 8 (7), 1-12, 2007
Systematic analysis of cell-to-cell expression variation of T lymphocytes in a human cohort identifies aging and genetic associations
Y Lu, A Biancotto, F Cheung, E Remmers, N Shah, JP McCoy, JS Tsang
Immunity 45 (5), 1162-1175, 2016
Genome-wide analysis of Epstein-Barr virus Rta DNA binding
AMF Heilmann, MA Calderwood, D Portal, Y Lu, E Johannsen
Journal of virology 86 (9), 5151-5164, 2012
Genome Rearrangements Caused by Depletion of Essential DNA Replication Proteins in Saccharomyces cerevisiae
E Cheng, JA Vaisica, J Ou, A Baryshnikova, Y Lu, FP Roth, GW Brown
Genetics 192 (1), 147-160, 2012
Identifying cycling genes by combining sequence homology and expression data
Y Lu, R Rosenfeld, Z Bar-Joseph
Bioinformatics 22 (14), e314-e322, 2006
A crowdsourcing approach for reusing and meta-analyzing gene expression data
N Shah, Y Guo, KV Wendelsdorf, Y Lu, R Sparks, JS Tsang
Nature biotechnology 34 (8), 803-806, 2016
Cross species expression analysis of innate immune response
Y Lu, R Rosenfeld, GJ Nau, Z Bar-Joseph
Journal of Computational Biology 17 (3), 253-268, 2010
Environment tunes propagation of cell-to-cell variation in the human macrophage gene network
AJ Martins, M Narayanan, T Prüstel, B Fixsen, K Park, RA Gottschalk, Y Lu, ...
Cell systems 4 (4), 379-392. e12, 2017
Temporal graphical models for cross-species gene regulatory network discovery
Y Liu, A Niculescu-Mizil, A Lozano, Y Lu
Journal of bioinformatics and computational biology 9 (02), 231-250, 2011
Computational methods for analyzing dynamic regulatory networks
A Gitter, Y Lu, Z Bar-Joseph
Computational Biology of Transcription Factor Binding, 419-441, 2010
Prevalence and pathogenicity of autoantibodies in patients with idiopathic CD4 lymphopenia
A Perez-Diez, CS Wong, X Liu, H Mystakelis, J Song, Y Lu, V Sheikh, ...
The Journal of clinical investigation 130 (10), 2020
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Articles 1–20