Handuo Shi
Handuo Shi
Verified email at stanford.edu
TitleCited byYear
A comprehensive, CRISPR-based functional analysis of essential genes in bacteria
JM Peters, A Colavin, H Shi, TL Czarny, MH Larson, S Wong, JS Hawkins, ...
Cell 165 (6), 1493-1506, 2016
2542016
Quantum cloning machines and the applications
H Fan, YN Wang, L Jing, JD Yue, HD Shi, YL Zhang, LZ Mu
Physics Reports 544 (3), 241-322, 2014
742014
Disruption of lipid homeostasis in the Gram-negative cell envelope activates a novel cell death pathway
HA Sutterlin, H Shi, KL May, A Miguel, S Khare, KC Huang, TJ Silhavy
Proceedings of the National Academy of Sciences 113 (11), E1565-E1574, 2016
592016
Rapid, precise quantification of bacterial cellular dimensions across a genomic-scale knockout library
T Ursell, TK Lee, D Shiomi, H Shi, C Tropini, RD Monds, A Colavin, ...
BMC biology 15 (1), 17, 2017
392017
Monoclonal antibody targeting the β-barrel assembly machine of Escherichia coli is bactericidal
KM Storek, MR Auerbach, H Shi, NK Garcia, D Sun, NN Nickerson, R Vij, ...
Proceedings of the National Academy of Sciences 115 (14), 3692-3697, 2018
342018
How to Build a Bacterial Cell: MreB as the Foreman of E. coli Construction
H Shi, BP Bratton, Z Gitai, KC Huang
Cell 172 (6), 1294-1305, 2018
332018
Programming a Pavlovian-like conditioning circuit in Escherichia coli
H Zhang, M Lin, H Shi, W Ji, L Huang, X Zhang, S Shen, R Gao, S Wu, ...
Nature communications 5, 3102, 2014
272014
Automated design of genetic toggle switches with predetermined bistability
S Chen, H Zhang, H Shi, W Ji, J Feng, Y Gong, Z Yang, Q Ouyang
ACS synthetic Biology 1 (7), 284-290, 2012
272012
Unified universal quantum cloning machine and fidelities
YN Wang, HD Shi, ZX Xiong, L Jing, XJ Ren, LZ Mu, H Fan
Physical Review A 84 (3), 034302, 2011
252011
A formalized design process for bacterial consortia that perform logic computing
W Ji, H Shi, H Zhang, R Sun, J Xi, D Wen, J Feng, Y Chen, X Qin, Y Ma, ...
PLoS One 8 (2), e57482, 2013
232013
RodZ modulates geometric localization of the bacterial actin MreB to regulate cell shape
A Colavin, H Shi, KC Huang
Nature communications 9 (1), 1280, 2018
222018
Deep phenotypic mapping of bacterial cytoskeletal mutants reveals physiological robustness to cell size
H Shi, A Colavin, M Bigos, C Tropini, RD Monds, KC Huang
Current Biology 27 (22), 3419-3429. e4, 2017
212017
Single-molecule imaging reveals modulation of cell wall synthesis dynamics in live bacterial cells
TK Lee, K Meng, H Shi, KC Huang
Nature communications 7, 13170, 2016
212016
General quantum key distribution in higher dimension
ZX Xiong, HD Shi, YN Wang, L Jing, J Lei, LZ Mu, H Fan
Physical Review A 85 (1), 012334, 2012
162012
Strain Library Imaging Protocol for high-throughput, automated single-cell microscopy of large bacterial collections arrayed on multiwell plates
H Shi, A Colavin, TK Lee, KC Huang
Nature protocols 12 (2), 429, 2017
122017
Minimal input sets determining phase-covariant and universal quantum cloning
L Jing, YN Wang, HD Shi, LZ Mu, H Fan
Physical Review A 86 (6), 062315, 2012
42012
Measurements of gene expression at steady state improve the predictability of part assembly
HM Zhang, S Chen, H Shi, W Ji, Y Zong, Q Ouyang, C Lou
ACS synthetic biology 5 (3), 269-273, 2015
32015
Chromosome Organization: Making Room in a Crowd
H Shi, KC Huang
Current Biology 29 (13), R630-R632, 2019
2019
Conservation of conformational dynamics across prokaryotic actins
N Ng, H Shi, A Colavin, KC Huang
PLoS computational biology 15 (4), e1006683, 2019
2019
Precise regulation of the relative rates of surface area and volume synthesis in dynamic environments
H Shi, Y Hu, KC Huang
bioRxiv, 806885, 2019
2019
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Articles 1–20