Chiara Damiani
Chiara Damiani
Department of Biotechnology and Biosciences
Verified email at unimib.it - Homepage
Title
Cited by
Cited by
Year
Dynamical properties of a Boolean model of gene regulatory network with memory
A Graudenzi, R Serra, M Villani, C Damiani, A Colacci, SA Kauffman
Journal of Computational Biology 18 (10), 1291-1303, 2011
542011
Computational Strategies for a System-Level Understanding of Metabolism
P Cazzaniga, C Damiani, D Besozzi, R Colombo, MS Nobile, D Gaglio, ...
Metabolites 4 (4), 1034-1087, 2014
532014
A metabolic core model elucidates how enhanced utilization of glucose and glutamine, with enhanced glutamine-dependent lactate production, promotes cancer cell growth: Theá…
C Damiani, R Colombo, D Gaglio, F Mastroianni, D Pescini, ...
PLoS computational biology 13 (9), e1005758, 2017
332017
Cell-cell interaction and diversity of emergent behaviours
C Damiani, R Serra, M Villani, SA Kauffman, A Colacci
IET systems biology 5 (2), 137-144, 2011
332011
The diffusion of perturbations in a model of coupled random boolean networks
R Serra, M Villani, C Damiani, A Graudenzi, A Colacci
Lecture Notes in Computer Science, 315-322, 2008
302008
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism
C Damiani, D Maspero, M Di Filippo, R Colombo, D Pescini, A Graudenzi, ...
PLoS computational biology 15 (2), e1006733, 2019
282019
Zooming-in on cancer metabolic rewiring with tissue specific constraint-based models
M Di Filippo, R Colombo, C Damiani, D Pescini, D Gaglio, M Vanoni, ...
Computational biology and chemistry 62, 60-69, 2016
282016
Information transfer among coupled random boolean networks
C Damiani, SA Kauffman, R Serra, M Villani, A Colacci
International Conference on Cellular Automata, 1-11, 2010
212010
Growth and Division in a Dynamic Protocell Model
M Villani, A Filisetti, A Graudenzi, C Damiani, T Carletti, R Serra
Life 4 (4), 837-864, 2014
192014
Interacting random boolean networks
R Serra, M Villani, C Damiani, A Graudenzi, A Colacci, SA Kauffman
Proceedings of ECCS07: European Conference on Complex Systems, 1-15, 2007
192007
An ensemble evolutionary constraint-based approach to understand the emergence of metabolic phenotypes
C Damiani, D Pescini, R Colombo, S Molinari, L Alberghina, M Vanoni, ...
Natural Computing 13 (3), 321-331, 2014
172014
Integration of transcriptomic data and metabolic networks in cancer samples reveals highly significant prognostic power
A Graudenzi, D Maspero, M Di Filippo, M Gnugnoli, C Isella, G Mauri, ...
Journal of biomedical informatics, 2018
162018
CABeRNET: a Cytoscape app for augmented Boolean models of gene regulatory NETworks
A Paroni, A Graudenzi, G Caravagna, C Damiani, G Mauri, M Antoniotti
BMC bioinformatics 17 (1), 64, 2016
162016
Parameter sensitivity analysis of stochastic models: Application to catalytic reaction networks
C Damiani, A Filisetti, A Graudenzi, P Lecca
Computational biology and chemistry 42, 5-17, 2013
162013
popFBA: tackling intratumour heterogeneity with Flux Balance Analysis
C Damiani, M Di Filippo, D Pescini, D Maspero, R Colombo, G Mauri
Bioinformatics 33 (14), i311-i318, 2017
142017
Systems metabolomics: from metabolomic snapshots to design principles
C Damiani, D Gaglio, E Sacco, L Alberghina, M Vanoni
Current Opinion in Biotechnology 63, 190-199, 2020
132020
A stochastic model of catalytic reaction networks in protocells
R Serra, A Filisetti, M Villani, A Graudenzi, C Damiani, T Panini
Natural Computing 13 (3), 367-377, 2014
132014
A stochastic model of catalytic reaction networks in protocells
R Serra, A Filisetti, M Villani, A Graudenzi, C Damiani, T Panini
Natural Computing 13 (3), 367-377, 2014
132014
On RAF sets and autocatalytic cycles in random reaction networks
A Filisetti, M Villani, C Damiani, A Graudenzi, A Roli, W Hordijk, R Serra
Italian Workshop on Artificial Life and Evolutionary Computation, 113-126, 2014
122014
Dynamical regimes in non-ergodic random Boolean networks
M Villani, D Campioli, C Damiani, A Roli, A Filisetti, R Serra
Natural Computing 16 (2), 353-363, 2017
112017
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Articles 1–20