| CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins D Couvin, A Bernheim, C Toffano-Nioche, M Touchon, J Michalik, ... Nucleic acids research 46 (W1), W246-W251, 2018 | 1080 | 2018 |
| Patterns of variant polyadenylation signal usage in human genes E Beaudoing, S Freier, JR Wyatt, JM Claverie, D Gautheret Genome research 10 (7), 1001-1010, 2000 | 875 | 2000 |
| Rfam 14: expanded coverage of metagenomic, viral and microRNA families I Kalvari, EP Nawrocki, N Ontiveros-Palacios, J Argasinska, K Lamkiewicz, ... Nucleic Acids Research 49 (D1), D192-D200, 2021 | 669 | 2021 |
| RNAMotif, an RNA secondary structure definition and search algorithm TJ Macke, DJ Ecker, RR Gutell, D Gautheret, DA Case, R Sampath Nucleic acids research 29 (22), 4724-4735, 2001 | 628 | 2001 |
| Direct RNA motif definition and identification from multiple sequence alignments using secondary structure profiles D Gautheret, A Lambert Journal of molecular biology 313 (5), 1003-1011, 2001 | 434 | 2001 |
| The genome sequence of the model ascomycete fungus Podospora anserina E Espagne, O Lespinet, F Malagnac, C Da Silva, O Jaillon, BM Porcel, ... Genome biology 9, 1-22, 2008 | 353 | 2008 |
| ARNold: a web tool for the prediction of Rho-independent transcription terminators M Naville, A Ghuillot-Gaudeffroy, A Marchais, D Gautheret RNA biology 8 (1), 11-13, 2011 | 327 | 2011 |
| Novel selenoproteins identified in silico andin Vivo by using a conserved RNA structural motif A Lescure, D Gautheret, P Carbon, A Krol Journal of Biological Chemistry 274 (53), 38147-38154, 1999 | 327 | 1999 |
| Acquired initiating mutations in early hematopoietic cells of CLL patients F Damm, E Mylonas, A Cosson, K Yoshida, V Della Valle, E Mouly, ... Cancer discovery 4 (9), 1088-1101, 2014 | 311 | 2014 |
| The Combination of Symbolic and Numerical Computation or Three-Dimensional Modeling of RNA F Major, M Turcotte, D Gautheret, G Lapalme, E Fillion, R Cedergren Science 253 (5025), 1255-1260, 1991 | 271 | 1991 |
| Identification of alternate polyadenylation sites and analysis of their tissue distribution using EST data E Beaudoing, D Gautheret Genome research 11 (9), 1520-1526, 2001 | 212 | 2001 |
| Experimental discovery of small RNAs in Staphylococcus aureus reveals a riboregulator of central metabolism C Bohn, C Rigoulay, S Chabelskaya, CM Sharma, A Marchais, P Skorski, ... Nucleic acids research 38 (19), 6620-6636, 2010 | 209 | 2010 |
| Gene structure, expression pattern, and biological activity of mouse killer cell activating receptor-associated protein (KARAP)/DAP-12 E Tomasello, L Olcese, F Vély, C Geourgeon, M Bléry, A Moqrich, ... Journal of Biological Chemistry 273 (51), 34115-34119, 1998 | 197 | 1998 |
| Alternate polyadenylation in human mRNAs: a large-scale analysis by EST clustering D Gautheret, O Poirot, F Lopez, S Audic, JM Claverie Genome research 8 (5), 524-530, 1998 | 176 | 1998 |
| Sequence determinants in human polyadenylation site selection M Legendre, D Gautheret BMC genomics 4, 1-9, 2003 | 170 | 2003 |
| RNAML: a standard syntax for exchanging RNA information A Waugh, P Gendron, R Altman, JW Brown, D Case, D Gautheret, ... Rna 8 (6), 707-717, 2002 | 161 | 2002 |
| GU base pairing motifs in ribosomal RNA. D Gautheret, D Konings, RR Gutell Rna 1 (8), 807-814, 1995 | 160 | 1995 |
| A major family of motifs involving G? A mismatches in ribosomal RNA D Gautheret, D Konings, RR Gutell Journal of molecular biology 242 (1), 1-8, 1994 | 160 | 1994 |
| Pattern searching/alignment with RNA primary and secondary structures: an effective descriptor for tRNA D Gautheret, F Major, R Cedergren Bioinformatics 6 (4), 325-331, 1990 | 157 | 1990 |
| Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus CJ Chen, Q Liu, YC Zhang, LH Qu, YQ Chen, D Gautheret RNA biology 8 (3), 538-547, 2011 | 136 | 2011 |
