Didier DEBROAS
Didier DEBROAS
UCA
Adresse e-mail validée de uca.fr
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Metavir 2: new tools for viral metagenome comparison and assembled virome analysis
S Roux, J Tournayre, A Mahul, D Debroas, F Enault
BMC bioinformatics 15 (1), 1-12, 2014
2082014
Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters
M Hugoni, N Taib, D Debroas, I Domaizon, IJ Dufournel, G Bronner, ...
Proceedings of the National Academy of Sciences 110 (15), 6004-6009, 2013
2082013
Assessing the diversity and specificity of two freshwater viral communities through metagenomics
S Roux, F Enault, A Robin, V Ravet, S Personnic, S Theil, J Colombet, ...
PloS one 7 (3), e33641, 2012
2052012
Genetic diversity of small eukaryotes in lakes differing by their trophic status
M Lefranc, A Thénot, C Lepere, D Debroas
Applied and environmental microbiology 71 (10), 5935-5942, 2005
1972005
Plastics in the North Atlantic garbage patch: a boat-microbe for hitchhikers and plastic degraders
D Debroas, A Mone, A Ter Halle
Science of the total environment 599, 1222-1232, 2017
1742017
Metavir: a web server dedicated to virome analysis
S Roux, M Faubladier, A Mahul, N Paulhe, A Bernard, D Debroas, ...
Bioinformatics 27 (21), 3074-3075, 2011
1612011
Evolution and diversity of the Microviridae viral family through a collection of 81 new complete genomes assembled from virome reads
S Roux, M Krupovic, A Poulet, D Debroas, F Enault
PloS one 7 (7), e40418, 2012
1492012
Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget–France)
D Debroas, JF Humbert, F Enault, G Bronner, M Faubladier, E Cornillot
Environmental microbiology 11 (9), 2412-2424, 2009
1342009
Anaerobic microbial communities in Lake Pavin, a unique meromictic lake in France
AC Lehours, C Bardot, A Thenot, D Debroas, G Fonty
Applied and Environmental Microbiology 71 (11), 7389-7400, 2005
1252005
Unexpected importance of potential parasites in the composition of the freshwater small-eukaryote community
C Lepère, I Domaizon, D Debroas
Applied and environmental microbiology 74 (10), 2940-2949, 2008
1172008
Short‐term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes
JF Mangot, I Domaizon, N Taib, N Marouni, E Duffaud, G Bronner, ...
Environmental Microbiology 15 (6), 1745-1758, 2013
1092013
Succession and regulation factors of small eukaryote community composition in a lacustrine ecosystem (Lake Pavin)
C Lepere, D Boucher, L Jardillier, I Domaizon, D Debroas
Applied and environmental microbiology 72 (4), 2971-2981, 2006
1072006
Comparison of the structure and composition of bacterial communities from temperate and tropical freshwater ecosystems
JF Humbert, U Dorigo, P Cecchi, B Le Berre, D Debroas, M Bouvy
Environmental microbiology 11 (9), 2339-2350, 2009
1042009
Assessment of viral community functional potential from viral metagenomes may be hampered by contamination with cellular sequences
S Roux, M Krupovic, D Debroas, P Forterre, F Enault
Open biology 3 (12), 130160, 2013
1032013
Succession of bacterial community composition over two consecutive years in two aquatic systems: a natural lake and a lake-reservoir
D Boucher, L Jardillier, D Debroas
FEMS microbiology ecology 55 (1), 79-97, 2006
992006
A strong link between marine microbial community composition and function challenges the idea of functional redundancy
PE Galand, O Pereira, C Hochart, JC Auguet, D Debroas
The ISME journal 12 (10), 2470-2478, 2018
952018
Bacterial communities associated with Microcystis colonies differ from free‐living communities living in the same ecosystem
B Parveen, V Ravet, C Djediat, I Mary, C Quiblier, D Debroas, JF Humbert
Environmental Microbiology Reports 5 (5), 716-724, 2013
912013
Structural diversity of bacterial communities associated with bloom-forming freshwater cyanobacteria differs according to the cyanobacterial genus
I Louati, N Pascault, D Debroas, C Bernard, JF Humbert, J Leloup
PloS one 10 (11), e0140614, 2015
892015
Phylogenetic affiliation of SSU rRNA genes generated by massively parallel sequencing: new insights into the freshwater protist diversity
N Taib, JF Mangot, I Domaizon, G Bronner, D Debroas
PLoS One 8 (3), e58950, 2013
862013
Active microorganisms thrive among extremely diverse communities in cloud water
P Amato, M Joly, L Besaury, A Oudart, N Taïb, AI Moné, L Deguillaume, ...
PloS one 12 (8), e0182869, 2017
822017
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