Evelien Bunnik
Evelien Bunnik
Assistant Professor at University of Texas Health Science Center at San Antonio
Adresse e-mail validée de uthscsa.edu - Page d'accueil
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Characterization of cereal toxicity for celiac disease patients based on protein homology in grains
LW Vader, DT Stepniak, EM Bunnik, YMC Kooy, W De Haan, JW Drijfhout, ...
Gastroenterology 125 (4), 1105-1113, 2003
3142003
Autologous neutralizing humoral immunity and evolution of the viral envelope in the course of subtype B human immunodeficiency virus type 1 infection
EM Bunnik, L Pisas, AC Van Nuenen, H Schuitemaker
Journal of virology 82 (16), 7932-7941, 2008
2322008
Cross-reactive neutralizing humoral immunity does not protect from HIV type 1 disease progression
Z Euler, MJ van Gils, EM Bunnik, P Phung, B Schweighardt, T Wrin, ...
The Journal of infectious diseases 201 (7), 1045-1053, 2010
2032010
Three-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression
F Ay, EM Bunnik, N Varoquaux, SM Bol, J Prudhomme, JP Vert, WS Noble, ...
Genome research 24 (6), 974-988, 2014
1892014
Adaptation of HIV-1 envelope gp120 to humoral immunity at a population level
EM Bunnik, Z Euler, MRA Welkers, BDM Boeser-Nunnink, ML Grijsen, ...
Nature medicine 16 (9), 995-997, 2010
1272010
Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum
EM Bunnik, DWD Chung, M Hamilton, N Ponts, A Saraf, J Prudhomme, ...
Genome biology 14 (11), 1-18, 2013
1202013
Longer V1V2 region with increased number of potential N-linked glycosylation sites in the HIV-1 envelope glycoprotein protects against HIV-specific neutralizing antibodies
MJ van Gils, EM Bunnik, BD Boeser-Nunnink, JA Burger, M Terlouw-Klein, ...
Journal of virology 85 (14), 6986-6995, 2011
992011
Rapid escape from preserved cross-reactive neutralizing humoral immunity without loss of viral fitness in HIV-1-infected progressors and long-term nonprogressors
MJ Van Gils, EM Bunnik, JA Burger, Y Jacob, B Schweighardt, T Wrin, ...
Journal of virology 84 (7), 3576-3585, 2010
962010
Detection of inferred CCR5-and CXCR4-using HIV-1 variants and evolutionary intermediates using ultra-deep pyrosequencing
EM Bunnik, LC Swenson, D Edo-Matas, W Huang, W Dong, A Frantzell, ...
PLoS Pathog 7 (6), e1002106, 2011
732011
Increased neutralization sensitivity of recently emerged CXCR4-using human immunodeficiency virus type 1 strains compared to coexisting CCR5-using variants from the same patient
EM Bunnik, ED Quakkelaar, AC Van Nuenen, B Boeser-Nunnink, ...
Journal of virology 81 (2), 525-531, 2007
732007
Genome-wide mapping of DNA methylation in the human malaria parasite Plasmodium falciparum
N Ponts, L Fu, EY Harris, J Zhang, DWD Chung, MC Cervantes, ...
Cell host & microbe 14 (6), 696-706, 2013
692013
Activity of broadly neutralizing antibodies, including PG9, PG16, and VRC01, against recently transmitted subtype B HIV-1 variants from early and late in the epidemic
Z Euler, EM Bunnik, JA Burger, BDM Boeser-Nunnink, ML Grijsen, ...
Journal of virology 85 (14), 7236-7245, 2011
692011
The multifunctional autophagy pathway in the human malaria parasite, Plasmodium falciparum
S Cervantes, EM Bunnik, A Saraf, CM Conner, A Escalante, ME Sardiu, ...
Autophagy 10 (1), 80-92, 2014
642014
The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum
EM Bunnik, G Batugedara, A Saraf, J Prudhomme, L Florens, KG Le Roch
Genome biology 17 (1), 1-18, 2016
622016
Multiple dimensions of epigenetic gene regulation in the malaria parasite Plasmodium falciparum Gene regulation via histone modifications, nucleosome positioning and …
F Ay, EM Bunnik, N Varoquaux, JP Vert, WS Noble, KG Le Roch
Bioessays 37 (2), 182-194, 2015
592015
Reconstructing the dynamics of HIV evolution within hosts from serial deep sequence data
AFY Poon, LC Swenson, EM Bunnik, D Edo-Matas, H Schuitemaker, ...
PLoS Comput Biol 8 (11), e1002753, 2012
542012
Nascent RNA sequencing reveals mechanisms of gene regulation in the human malaria parasite Plasmodium falciparum
XM Lu, G Batugedara, M Lee, J Prudhomme, EM Bunnik, KG Le Roch
Nucleic acids research 45 (13), 7825-7840, 2017
482017
DNA-encoded nucleosome occupancy is associated with transcription levels in the human malaria parasite Plasmodium falciparum
EM Bunnik, A Polishko, J Prudhomme, N Ponts, SS Gill, S Lonardi, ...
BMC genomics 15 (1), 1-15, 2014
462014
Changes in genome organization of parasite-specific gene families during the Plasmodium transmission stages
EM Bunnik, KB Cook, N Varoquaux, G Batugedara, J Prudhomme, A Cort, ...
Nature communications 9 (1), 1-15, 2018
442018
An introduction to functional genomics and systems biology
EM Bunnik, KG Le Roch
Advances in wound care 2 (9), 490-498, 2013
442013
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