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Rachel Daniels
Rachel Daniels
University of Massachusetts Chan Medical School; Broad Institute
Adresse e-mail validée de umassmed.edu
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A general SNP-based molecular barcode for Plasmodium falciparum identification and tracking
R Daniels, SK Volkman, DA Milner, N Mahesh, DE Neafsey, DJ Park, ...
Malaria journal 7, 1-11, 2008
2452008
Modeling malaria genomics reveals transmission decline and rebound in Senegal
RF Daniels, SF Schaffner, EA Wenger, JL Proctor, HH Chang, W Wong, ...
Proceedings of the National Academy of Sciences 112 (22), 7067-7072, 2015
1862015
Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparumpopulation divergence
DE Neafsey, SF Schaffner, SK Volkman, D Park, P Montgomery, ...
Genome biology 9, 1-16, 2008
1462008
Artemisinin resistance without pfkelch13 mutations in Plasmodium falciparum isolates from Cambodia
A Mukherjee, S Bopp, P Magistrado, W Wong, R Daniels, A Demas, ...
Malaria journal 16, 1-12, 2017
1272017
Hybrid selection for sequencing pathogen genomes from clinical samples
A Melnikov, K Galinsky, P Rogov, T Fennell, D Van Tyne, C Russ, ...
Genome biology 12, 1-9, 2011
1192011
Identification and Functional Validation of the Novel Antimalarial Resistance Locus PF10_0355 in Plasmodium falciparum
D Van Tyne, DJ Park, SF Schaffner, DE Neafsey, E Angelino, JF Cortese, ...
PLoS genetics 7 (4), e1001383, 2011
1112011
Genetic surveillance detects both clonal and epidemic transmission of malaria following enhanced intervention in Senegal
R Daniels, HH Chang, PD Séne, DC Park, DE Neafsey, SF Schaffner, ...
PloS one 8 (4), e60780, 2013
1082013
Development of a Single Nucleotide Polymorphism Barcode to Genotype Plasmodium vivax Infections
ML Baniecki, AL Faust, SF Schaffner, DJ Park, K Galinsky, RF Daniels, ...
PLoS neglected tropical diseases 9 (3), e0003539, 2015
952015
Clonal Outbreak of Plasmodium falciparum Infection in Eastern Panama
N Obaldia III, NK Baro, JE Calzada, AM Santamaria, R Daniels, W Wong, ...
The Journal of infectious diseases 211 (7), 1087-1096, 2015
842015
COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data
K Galinsky, C Valim, A Salmier, B de Thoisy, L Musset, E Legrand, ...
Malaria journal 14, 1-9, 2015
792015
Rapid, field-deployable method for genotyping and discovery of single-nucleotide polymorphisms associated with drug resistance in Plasmodium falciparum
R Daniels, D Ndiaye, M Wall, J McKinney, PD Séne, PC Sabeti, ...
Antimicrobial agents and chemotherapy 56 (6), 2976-2986, 2012
682012
Natural Products from isnA-Containing Biosynthetic Gene Clusters Recovered from the Genomes of Cultured and Uncultured Bacteria
SF Brady, JD Bauer, MF Clarke-Pearson, R Daniels
Journal of the American Chemical Society 129 (40), 12102-12103, 2007
602007
Genetic relatedness analysis reveals the cotransmission of genetically related Plasmodium falciparum parasites in Thiès, Senegal
W Wong, AD Griggs, RF Daniels, SF Schaffner, D Ndiaye, AK Bei, ...
Genome Medicine 9, 1-12, 2017
492017
Detection of low-density Plasmodium falciparum infections using amplicon deep sequencing
AM Early, RF Daniels, TM Farrell, J Grimsby, SK Volkman, DF Wirth, ...
Malaria Journal 18, 1-13, 2019
462019
Evidence of non-Plasmodium falciparum malaria infection in Kédougou, Sénégal
RF Daniels, AB Deme, JF Gomis, B Dieye, K Durfee, JI Thwing, FB Fall, ...
Malaria journal 16, 1-7, 2017
462017
Molecular epidemiology of Plasmodium falciparum kelch13 mutations in Senegal determined by using targeted amplicon deep sequencing
E Talundzic, YD Ndiaye, AB Deme, C Olsen, DS Patel, S Biliya, R Daniels, ...
Antimicrobial agents and chemotherapy 61 (3), 10.1128/aac. 02116-16, 2017
432017
Persistence of Plasmodium falciparum parasitemia after artemisinin combination therapy: evidence from a randomized trial in Uganda
HH Chang, E Meibalan, J Zelin, R Daniels, AC Eziefula, EC Meyer, ...
Scientific Reports 6 (1), 26330, 2016
432016
Polymorphism in dhfr/dhps genes, parasite density and ex vivo response to pyrimethamine in Plasmodium falciparum malaria parasites in Thies, Senegal
D Ndiaye, B Dieye, YD Ndiaye, D Van Tyne, R Daniels, AK Bei, A Mbaye, ...
International Journal for Parasitology: Drugs and Drug Resistance 3, 135-142, 2013
392013
Application of genomics to field investigations of malaria by the international centers of excellence for malaria research
SK Volkman, D Ndiaye, M Diakite, OA Koita, D Nwakanma, RF Daniels, ...
Acta tropica 121 (3), 324-332, 2012
372012
Malaria prevalence, prevention and treatment seeking practices among nomadic pastoralists in northern Senegal
MC Seck, J Thwing, FB Fall, JF Gomis, A Deme, YD Ndiaye, R Daniels, ...
Malaria journal 16, 1-11, 2017
352017
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