Tarcisio Mendes De Farias
Tarcisio Mendes De Farias
SIB Swiss Institute of Bioinformatics
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The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces
AM Altenhoff, NM Glover, CM Train, K Kaleb, A Warwick Vesztrocy, ...
Nucleic acids research 46 (D1), D477-D485, 2018
IfcWoD, Semantically Adapting IFC Model Relations into OWL Properties
TM de Farias, A Roxin, C Nicolle
Proceedings of the 32nd CIB W78 Conference on Information Technology in …, 2015
The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals
FB Bastian, J Roux, A Niknejad, A Comte, SS Fonseca Costa, ...
Nucleic Acids Research 49 (D1), D831-D847, 2021
OMA orthology in 2021: website overhaul, conserved isoforms, ancestral gene order and more
AM Altenhoff, CM Train, KJ Gilbert, I Mediratta, T Mendes de Farias, D Moi, ...
Nucleic Acids Research, 2020
A performance benchmark over semantic rule checking approaches in construction industry
P Pauwels, TM de Farias, C Zhang, A Roxin, J Beetz, J De Roo, C Nicolle
Advanced Engineering Informatics 33, 68-88, 2017
SWRL Rule-selection Methodology for Ontology Interoperability
TM De Farias, A Roxin, C Nicolle
Data & Knowledge Engineering, 2015
Enabling semantic queries across federated bioinformatics databases
AC Sima, T Mendes de Farias, E Zbinden, M Anisimova, M Gil, ...
Database 2019, 2019
A rule-based methodology to extract building model views
TM Farias, A Roxin, C Nicolle
Automation in Construction 92, 214-229, 2018
Cobieowl, an owl ontology based on cobie standard
MT Farias, A Roxin, C Nicolle
OTM Confederated International Conferences" On the Move to Meaningful …, 2015
A rule based system for semantical enrichment of building information exchange
TM De Farias, A Roxin, C Nicolle
CEUR Proceedings of RuleML2014, the 8th International Web Rule Symposium …, 2014
FOWLA, a federated architecture for ontologies
TM Farias, A Roxin, C Nicolle
International Symposium on Rules and Rule Markup Languages for the Semantic …, 2015
Querying knowledge graphs in natural language
S Liang, K Stockinger, TM de Farias, M Anisimova, M Gil
Journal of big data 8 (1), 1-23, 2021
Querying and reasoning over large scale building data sets: an outline of a performance benchmark
P Pauwels, TM De Farias, C Zhang, A Roxin, J Beetz, J De Roo, C Nicolle
Proceedings of the International Workshop on Semantic Big Data, 1-6, 2016
Semantic integration and enrichment of heterogeneous biological databases
AC Sima, K Stockinger, TM Farias, M Gil
Evolutionary Genomics, 655-690, 2019
Semantic web technologies for implementing cost-effective and interoperable building information modeling
TM De Farias, AM Roxin, C Nicolle
Proceedings of the 14th International Conference on Informatics in Economy …, 2015
A federated approach for interoperating AEC/FM ontologies
TM de Farias, A Roxin, C Nicolle
LDAC2016 - 4th Linked Data in Architecture and Construction Workshop , Jun …, 2016
Ten years of collaborative progress in the quest for orthologs
B Linard, I Ebersberger, SE McGlynn, N Glover, T Mochizuki, M Patricio, ...
Molecular biology and evolution 38 (8), 3033-3045, 2021
Leveraging logical rules for efficacious representation of large orthology datasets
TM de Farias, H Chiba, JT Fernández-Breis
Proceedings of the 10th International Semantic Web Applications and Tools …, 2017
INODE: building an end-to-end data exploration system in practice [extended vision]
S Amer-Yahia, G Koutrika, F Bastian, T Belmpas, M Braschler, U Brunner, ...
arXiv preprint arXiv:2104.04194, 2021
A hands-on introduction to querying evolutionary relationships across multiple data sources using SPARQL
AC Sima, C Dessimoz, K Stockinger, M Zahn-Zabal, TM de Farias
F1000Research 8, 2019
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