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Tarcisio Mendes De Farias
Tarcisio Mendes De Farias
SIB Swiss Institute of Bioinformatics
Adresse e-mail validée de sib.swiss
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The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces
AM Altenhoff, NM Glover, CM Train, K Kaleb, A Warwick Vesztrocy, ...
Nucleic acids research 46 (D1), D477-D485, 2018
2382018
OMA orthology in 2021: website overhaul, conserved isoforms, ancestral gene order and more
AM Altenhoff, CM Train, KJ Gilbert, I Mediratta, T Mendes de Farias, D Moi, ...
Nucleic Acids Research, 2020
1522020
The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals
FB Bastian, J Roux, A Niknejad, A Comte, SS Fonseca Costa, ...
Nucleic acids research 49 (D1), D831-D847, 2021
1332021
A performance benchmark over semantic rule checking approaches in construction industry
P Pauwels, TM de Farias, C Zhang, A Roxin, J Beetz, J De Roo, C Nicolle
Advanced Engineering Informatics 33, 68-88, 2017
612017
IfcWoD, Semantically Adapting IFC Model Relations into OWL Properties
TM de Farias, A Roxin, C Nicolle
Proceedings of the 32nd CIB W78 Conference on Information Technology in …, 2015
60*2015
Querying knowledge graphs in natural language
S Liang, K Stockinger, TM de Farias, M Anisimova, M Gil
Journal of big Data 8 (1), 3, 2021
502021
Enabling semantic queries across federated bioinformatics databases
AC Sima, T Mendes de Farias, E Zbinden, M Anisimova, M Gil, ...
Database 2019, baz106, 2019
452019
SWRL Rule-selection Methodology for Ontology Interoperability
TM De Farias, A Roxin, C Nicolle
Data & Knowledge Engineering, 2015
412015
A rule-based methodology to extract building model views
TM Farias, A Roxin, C Nicolle
Automation in Construction 92, 214-229, 2018
402018
Cobieowl, an owl ontology based on cobie standard
MT Farias, A Roxin, C Nicolle
On the Move to Meaningful Internet Systems: OTM 2015 Conferences …, 2015
352015
A rule based system for semantical enrichment of building information exchange
TM De Farias, A Roxin, C Nicolle
CEUR Proceedings of RuleML2014, the 8th International Web Rule Symposium …, 2014
292014
Ten years of collaborative progress in the quest for orthologs
B Linard, I Ebersberger, SE McGlynn, N Glover, T Mochizuki, M Patricio, ...
Molecular biology and evolution 38 (8), 3033-3045, 2021
272021
FOWLA, a federated architecture for ontologies
TM Farias, A Roxin, C Nicolle
Rule Technologies: Foundations, Tools, and Applications: 9th International …, 2015
262015
INODE: building an end-to-end data exploration system in practice
S Amer-Yahia, G Koutrika, M Braschler, D Calvanese, D Lanti, ...
ACM SIGMOD Record 50 (4), 23-29, 2022
202022
Semantic integration and enrichment of heterogeneous biological databases
AC Sima, K Stockinger, TM de Farias, M Gil
Evolutionary Genomics: Statistical and Computational Methods, 655-690, 2019
192019
Querying and reasoning over large scale building data sets: an outline of a performance benchmark
P Pauwels, TM De Farias, C Zhang, A Roxin, J Beetz, J De Roo, C Nicolle
Proceedings of the International Workshop on Semantic Big Data, 1-6, 2016
172016
Accessing scientific data through knowledge graphs with Ontop
D Calvanese, D Lanti, TM De Farias, A Mosca, G Xiao
Patterns 2 (10), 2021
122021
Semantic web technologies for implementing cost-effective and interoperable building information modeling
TM De Farias, AM Roxin, C Nicolle
Proceedings of the 14th International Conference on Informatics in Economy …, 2015
122015
Bio-SODA: Enabling Natural Language Question Answering over Knowledge Graphs without Training Data
AC Sima, TM de Farias, M Anisimova, C Dessimoz, M Robinson-Rechavi, ...
In 33rd International Conference on Scientific and Statistical Database …, 2021
102021
Leveraging logical rules for efficacious representation of large orthology datasets
TM de Farias, H Chiba, JT Fernández-Breis
Proceedings of the 10th International Semantic Web Applications and Tools …, 2017
102017
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