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Surojit Biswas
Surojit Biswas
Nabla Bio, Inc.
Adresse e-mail validée de nabla.bio
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Phytochromes function as thermosensors in Arabidopsis
JH Jung, M Domijan, C Klose, S Biswas, D Ezer, M Gao, AK Khattak, ...
Science 354 (6314), 886-889, 2016
6202016
Unified rational protein engineering with sequence-based deep representation learning
EC Alley, G Khimulya, S Biswas, M AlQuraishi, GM Church
Nature methods 16 (12), 1315-1322, 2019
5222019
The evening complex coordinates environmental and endogenous signals in Arabidopsis
D Ezer, JH Jung, H Lan, S Biswas, L Gregoire, MS Box, V Charoensawan, ...
Nature plants 3 (7), 1-12, 2017
1922017
Low-N protein engineering with data-efficient deep learning
S Biswas, G Khimulya, EC Alley, KM Esvelt, GM Church
Nature methods 18 (4), 389-396, 2021
1542021
Pseudomonas syringae type III effector HopBB1 promotes host transcriptional repressor degradation to regulate phytohormone responses and virulence
L Yang, PJPL Teixeira, S Biswas, OM Finkel, Y He, I Salas-Gonzalez, ...
Cell host & microbe 21 (2), 156-168, 2017
1022017
The G-box transcriptional regulatory code in Arabidopsis
D Ezer, SJK Shepherd, A Brestovitsky, P Dickinson, S Cortijo, ...
Plant physiology 175 (2), 628-640, 2017
862017
Learning microbial interaction networks from metagenomic count data
S Biswas, M Mcdonald, DS Lundberg, JL Dangl, V Jojic
Journal of Computational Biology 23 (6), 526-535, 2016
672016
The Molecular Basis of Host Specialization in Bean Pathovars of Pseudomonas syringae
DA Baltrus, MT Nishimura, KM Dougherty, S Biswas, MS Mukhtar, ...
Molecular plant-microbe interactions 25 (7), 877-888, 2012
642012
Single-sequence protein structure prediction using a language model and deep learning
R Chowdhury, N Bouatta, S Biswas, C Floristean, A Kharkar, K Roy, ...
Nature Biotechnology, 1-7, 2022
482022
Toward machine-guided design of proteins
S Biswas, G Kuznetsov, PJ Ogden, NJ Conway, RP Adams, GM Church
BioRxiv, 337154, 2018
382018
Variable Suites of Non-effector Genes Are Co-regulated in the Type III Secretion Virulence Regulon across the Pseudomonas syringae Phylogeny
TS Mucyn, S Yourstone, AL Lind, S Biswas, MT Nishimura, DA Baltrus, ...
PLoS pathogens 10 (1), e1003807, 2014
292014
Tradict enables accurate prediction of eukaryotic transcriptional states from 100 marker genes
S Biswas, K Kerner, PJPL Teixeira, JL Dangl, V Jojic, PA Wigge
Nature communications 8 (1), 1-10, 2017
15*2017
Biological averaging in RNA-seq
S Biswas, YN Agrawal, TS Mucyn, JL Dangl, CD Jones
arXiv preprint arXiv:1309.0670, 2013
152013
What to trust in a Magnetotelluric Model
KK Roy, S Dey, S Srivastava, S Biswas
J. Ind. Geophys. Union Jan 8 (2), 157-171, 2004
72004
The latent logarithm
S Biswas
arXiv preprint arXiv:1605.06064, 2016
22016
Principles of machine learning-guided protein engineering
S Biswas
Harvard University, 2020
12020
Publisher Correction: Single-sequence protein structure prediction using a language model and deep learning
R Chowdhury, N Bouatta, S Biswas, C Floristean, A Kharkar, K Roy, ...
Nature biotechnology, 2022
2022
CumbieJasonBotanyPlantPathologyVariableSuitesNon-Effector. pdf
TS Mucyn, S Yourstone, AL Lind, S Biswas, MT Nishimura, DA Baltrus, ...
2017
Phytochromes function as thermosensors in
JH Jung, M Domijan, C Klose, S Biswas, D Ezer, M Gao, AK Khattak, ...
American Association for the Advancement of Science, 2016
2016
Variable Suites of Non-effector Genes Are Co-regulated in the Type III Secretion
TS Mucyn, S Yourstone, AL Lind, S Biswas, MT Nishimura
2014
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