Kate B Cook
Kate B Cook
Health Canada [Previously: University of Toronto, University of Washington]
Verified email at canada.ca
Cited by
Cited by
The sequence and de novo assembly of the giant panda genome
R Li, W Fan, G Tian, H Zhu, L He, J Cai, Q Huang, Q Cai, B Li, Y Bai, ...
Nature 463 (7279), 311-317, 2010
A compendium of RNA-binding motifs for decoding gene regulation
D Ray, H Kazan, KB Cook, MT Weirauch, HS Najafabadi, X Li, ...
Nature 499 (7457), 172-177, 2013
Determination and inference of eukaryotic transcription factor sequence specificity
MT Weirauch, A Yang, M Albu, AG Cote, A Montenegro-Montero, P Drewe, ...
Cell 158 (6), 1431-1443, 2014
RBPDB: a database of RNA-binding specificities
KB Cook, H Kazan, K Zuberi, Q Morris, TR Hughes
Nucleic acids research 39 (suppl_1), D301-D308, 2010
High-throughput characterization of protein–RNA interactions
KB Cook, TR Hughes, QD Morris
Briefings in functional genomics 14 (1), 74-89, 2015
Brain tumor is a sequence-specific RNA-binding protein that directs maternal mRNA clearance during the Drosophila maternal-to-zygotic transition
JD Laver, X Li, D Ray, KB Cook, NA Hahn, S Nabeel-Shah, M Kekis, ...
Genome biology 16 (1), 1-30, 2015
The crystal structure of the NHL domain in complex with RNA reveals the molecular basis of Drosophila brain-tumor-mediated gene regulation
I Loedige, L Jakob, T Treiber, D Ray, M Stotz, N Treiber, J Hennig, ...
Cell reports 13 (6), 1206-1220, 2015
Changes in genome organization of parasite-specific gene families during the Plasmodium transmission stages
EM Bunnik, KB Cook, N Varoquaux, G Batugedara, J Prudhomme, A Cort, ...
Nature communications 9 (1), 1-15, 2018
The dynamic three-dimensional organization of the diploid yeast genome
S Kim, I Liachko, DG Brickner, K Cook, WS Noble, JH Brickner, ...
Elife 6, e23623, 2017
RNAcompete-S: Combined RNA sequence/structure preferences for RNA binding proteins derived from a single-step in vitro selection
KB Cook, S Vembu, KCH Ha, H Zheng, KU Laverty, TR Hughes, D Ray, ...
Methods 126, 18-28, 2017
Paralogs hnRNP L and hnRNP LL exhibit overlapping but distinct RNA binding constraints
SA Smith, D Ray, KB Cook, MJ Mallory, TR Hughes, KW Lynch
PloS one 8 (11), e80701, 2013
Retrieval of aerosol physical and chemical properties from mid-infrared extinction spectra
AY Zasetsky, ME Earle, B Cosic, R Schiwon, IA Grishin, R McPhail, ...
Journal of Quantitative Spectroscopy and Radiative Transfer 107 (2), 294-305, 2007
Predicting gene expression in the human malaria parasite Plasmodium falciparum using histone modification, nucleosome positioning, and 3D localization features
DF Read, K Cook, YY Lu, KG Le Roch, WS Noble
PLoS computational biology 15 (9), e1007329, 2019
Measuring significant changes in chromatin conformation with ACCOST
KB Cook, BH Hristov, KG Le Roch, JP Vert, WS Noble
Nucleic acids research 48 (5), 2303-2311, 2020
Predicting gene expression in the human malaria parasite Plasmodium falciparum
DF Read, YY Lu, K Cook, K Le Roch, WS Noble
bioRxiv, 431049, 2019
Base-pair resolution analysis of the effect of supercoiling on DNA flexibility and major groove recognition by triplex-forming oligonucleotides
ALB Pyne, A Noy, KHS Main, V Velasco-Berrelleza, MM Piperakis, ...
Nature communications 12 (1), 1-12, 2021
The system can't perform the operation now. Try again later.
Articles 1–16