Benoit Ballester
Benoit Ballester
INSERM - National Institute of Health and Medical Research
Adresse e-mail validée de inserm.fr
Titre
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Année
Ensembl 2008
P Flicek, BL Aken, K Beal, B Ballester, M Caccamo, Y Chen, L Clarke, ...
Nucleic Acids Research 36, 2008
2781*2008
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
A Khan, O Fornes, A Stigliani, M Gheorghe, JA Castro-Mondragon, ...
Nucleic acids research 46 (D1), D260-D266, 2018
11562018
Ensembl 2007
TJP Hubbard, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, ...
Nucleic acids research 35 (suppl_1), D610-D617, 2007
9862007
Ensembl 2009
TJP Hubbard, BL Aken, S Ayling, B Ballester, K Beal, E Bragin, S Brent, ...
Nucleic acids research 37 (suppl_1), D690-D697, 2009
9572009
Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding
D Schmidt, MD Wilson, B Ballester, PC Schwalie, GD Brown, A Marshall, ...
Science 328 (5981), 1036-1040, 2010
7742010
BioMart–biological queries made easy
D Smedley, S Haider, B Ballester, R Holland, D London, G Thorisson, ...
BMC genomics 10 (1), 1-12, 2009
6952009
JASPAR 2020: update of the open-access database of transcription factor binding profiles
O Fornes, JA Castro-Mondragon, A Khan, R Van der Lee, X Zhang, ...
Nucleic acids research 48 (D1), D87-D92, 2020
6062020
Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages
D Schmidt, PC Schwalie, MD Wilson, B Ballester, Â Gonçalves, C Kutter, ...
Cell 148 (1-2), 335-348, 2012
4782012
BioMart Central Portal—unified access to biological data
S Haider, B Ballester, D Smedley, J Zhang, P Rice, A Kasprzyk
Nucleic acids research 37 (suppl_2), W23-W27, 2009
3912009
Ensembl's 10th year
P Flicek, BL Aken, B Ballester, K Beal, E Bragin, S Brent, Y Chen, ...
Nucleic acids research 38 (suppl_1), D557-D562, 2010
3582010
ReMap 2018: an updated atlas of regulatory regions from an integrative analysis of DNA-binding ChIP-seq experiments
J Chèneby, M Gheorghe, M Artufel, A Mathelier, B Ballester
Nucleic acids research 46 (D1), D267-D275, 2018
1582018
Gene expression profiling identifies molecular subgroups among nodal peripheral T-cell lymphomas
B Ballester, O Ramuz, C Gisselbrecht, G Doucet, L Loi, B Loriod, ...
Oncogene 25 (10), 1560-1570, 2006
1552006
The chromatin environment shapes DNA replication origin organization and defines origin classes
C Cayrou, B Ballester, I Peiffer, R Fenouil, P Coulombe, JC Andrau, ...
Genome research 25 (12), 1873-1885, 2015
1252015
Integrative analysis of public ChIP-seq experiments reveals a complex multi-cell regulatory landscape
A Griffon, Q Barbier, J Dalino, J van Helden, S Spicuglia, B Ballester
Nucleic acids research 43 (4), e27-e27, 2015
1162015
High-throughput and quantitative assessment of enhancer activity in mammals by CapStarr-seq
L Vanhille, A Griffon, MA Maqbool, J Zacarias-Cabeza, LTM Dao, ...
Nature communications 6 (1), 1-10, 2015
1022015
Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways
B Ballester, A Medina-Rivera, D Schmidt, M Gonzàlez-Porta, M Carlucci, ...
Elife 3, e02626, 2014
832014
Involvement of G-quadruplex regions in mammalian replication origin activity
P Prorok, M Artufel, A Aze, P Coulombe, I Peiffer, L Lacroix, A Guédin, ...
Nature communications 10 (1), 1-16, 2019
552019
ReMap 2020: a database of regulatory regions from an integrative analysis of Human and Arabidopsis DNA-binding sequencing experiments
J Chèneby, Z Ménétrier, M Mestdagh, T Rosnet, A Douida, W Rhalloussi, ...
Nucleic acids research 48 (D1), D180-D188, 2020
532020
Gene profiling reveals specific oncogenic mechanisms and signaling pathways in oncocytic and papillary thyroid carcinoma
O Baris, D Mirebeau-Prunier, F Savagner, P Rodien, B Ballester, B Loriod, ...
Oncogene 24 (25), 4155-4161, 2005
532005
A map of direct TF–DNA interactions in the human genome
M Gheorghe, GK Sandve, A Khan, J Chèneby, B Ballester, A Mathelier
Nucleic acids research 47 (4), e21-e21, 2019
492019
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