Validation of an expanded carrier screen that optimizes sensitivity via full-exon sequencing and panel-wide copy number variant identification GJ Hogan, VS Vysotskaia, KA Beauchamp, S Seisenberger, PV Grauman, ... Clinical chemistry 64 (7), 1063-1073, 2018 | 69 | 2018 |
Reaction path optimization with holonomic constraints and kinetic energy potentials JB Brokaw, KR Haas, JW Chu Journal of Chemical Theory and Computation 5 (8), 2050-2061, 2009 | 40 | 2009 |
Expectation-maximization of the potential of mean force and diffusion coefficient in Langevin dynamics from single molecule FRET data photon by photon KR Haas, H Yang, JW Chu The Journal of Physical Chemistry B 117 (49), 15591-15605, 2013 | 36 | 2013 |
High-throughput fetal fraction amplification increases analytical performance of noninvasive prenatal screening NC Welker, AK Lee, RAS Kjolby, HY Wan, MR Theilmann, D Jeon, ... Genetics in Medicine 23 (3), 443-450, 2021 | 27 | 2021 |
Development and validation of a 36-gene sequencing assay for hereditary cancer risk assessment VS Vysotskaia, GJ Hogan, GM Gould, X Wang, AD Robertson, KR Haas, ... PeerJ 5, e3046, 2017 | 26 | 2017 |
Trajectory entropy of continuous stochastic processes at equilibrium KR Haas, H Yang, JW Chu The Journal of Physical Chemistry Letters 5 (6), 999-1003, 2014 | 24 | 2014 |
Fisher information metric for the Langevin equation and least informative models of continuous stochastic dynamics KR Haas, H Yang, JW Chu The Journal of chemical physics 139 (12), 2013 | 22 | 2013 |
Decomposition of energy and free energy changes by following the flow of work along reaction path K Haas, JW Chu The Journal of chemical physics 131 (14), 2009 | 21 | 2009 |
Analysis of trajectory entropy for continuous stochastic processes at equilibrium KR Haas, H Yang, JW Chu The Journal of Physical Chemistry B 118 (28), 8099-8107, 2014 | 17 | 2014 |
Software-assisted manual review of clinical next-generation sequencing data: an alternative to routine Sanger sequencing confirmation with equivalent results in> 15,000 … D Muzzey, S Kash, JI Johnson, LM Melroy, P Kaleta, KA Pierce, K Ready, ... The Journal of Molecular Diagnostics 21 (2), 296-306, 2019 | 16 | 2019 |
Next-generation sequencing assay accurately determines carrier status for spinal muscular atrophy X Wang, HY Wan, CB Oyolu ASHG annual meeting, 2015 | 2 | 2015 |
Software-assisted manual review of clinical NGS data: an alternative to routine Sanger sequencing confirmation with equivalent results in> 15,000 hereditary cancer screens D Muzzey, S Kash, JI Johnson, LM Melroy, P Kaleta, KA Pierce, K Ready, ... bioRxiv, 305011, 2018 | 1 | 2018 |
Development and validation of an expanded carrier screen that optimizes sensitivity via full-exon sequencing and panel-wide copy-number-variant identification GJ Hogan, VS Vysotskaia, S Seisenberger, PV Grauman, KA Beauchamp, ... bioRxiv, 178350, 2017 | 1 | 2017 |
Bayesian sex caller A Lee, K Haas, K D'auria US Patent App. 18/020,416, 2024 | | 2024 |
Copy number variant caller X Wang, PV GRAUMAN US Patent App. 17/554,721, 2022 | | 2022 |
Deep learning based variant calling using machine learning S Hong, K Beauchamp, K Haas US Patent App. 17/039,826, 2022 | | 2022 |
eP443: Fetal fraction amplification within NIPS enables detection of clinically-relevant genome-wide copy-number variants to 1Mb resolution A Acevedo, S Cox, H Labreche, M Alfaro, S Pierson, S Hancock, K Moyer, ... Genetics in Medicine 24 (3), S278, 2022 | | 2022 |
Copy number variant caller SH HONG, P KALETA, GJ Hogan US Patent App. 17/111,272, 2021 | | 2021 |
664 High-throughput fetal-fraction amplification increases analytical performance of noninvasive prenatal screening D Muzzey, N Welker, A Lee, R Kjolby, H Wan, M Theilmann, D Jeon, ... American Journal of Obstetrics & Gynecology 224 (2), S417-S418, 2021 | | 2021 |
High-Throughput Fetal-Fraction Amplification Increases Analytical Performance of Noninvasive Prenatal Screening D Muzzey, N Welker, A Lee, R Kjolby, H Wan, M Theilmann, D Jeon, ... JOURNAL OF MOLECULAR DIAGNOSTICS 22 (11), S8-S8, 2020 | | 2020 |