Jean-Philippe Vert
Jean-Philippe Vert
Google Brain / Mines ParisTech
Adresse e-mail validée de mines-paristech.fr - Page d'accueil
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Wisdom of crowds for robust gene network inference
D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ...
Nature methods 9 (8), 796-804, 2012
13342012
Group lasso with overlap and graph lasso
L Jacob, G Obozinski, JP Vert
Proceedings of the 26th annual international conference on machine learning …, 2009
9732009
Kernel methods in computational biology
B Schölkopf, K Tsuda, JP Vert
MIT press, 2004
8532004
HiC-Pro: an optimized and flexible pipeline for Hi-C data processing
N Servant, N Varoquaux, BR Lajoie, E Viara, CJ Chen, JP Vert, E Heard, ...
Genome biology 16 (1), 1-11, 2015
6422015
A community effort to assess and improve drug sensitivity prediction algorithms
Nature Biotechnology 32, 1202-1212, 2014
5022014
Protein homology detection using string alignment kernels
H Saigo, JP Vert, N Ueda, T Akutsu
Bioinformatics 20 (11), 1682-1689, 2004
4662004
Clustered multi-task learning: A convex formulation
L Jacob, F Bach, JP Vert
arXiv preprint arXiv:0809.2085, 2008
4642008
Support vector machine applications in computational biology
WS Noble
Kernel methods in computational biology 71, 92, 2004
3892004
A path following algorithm for the graph matching problem
M Zaslavskiy, F Bach, JP Vert
IEEE Transactions on Pattern Analysis and Machine Intelligence 31 (12), 2227 …, 2008
3722008
A primer on kernel methods
JP Vert, K Tsuda, B Schölkopf
Kernel methods in computational biology 47, 35-70, 2004
3662004
The influence of feature selection methods on accuracy, stability and interpretability of molecular signatures
AC Haury, P Gestraud, JP Vert
PloS one 6 (12), e28210, 2011
3522011
Protein-ligand interaction prediction: an improved chemogenomics approach
L Jacob, JP Vert
Bioinformatics 24 (19), 2149-2156, 2008
3212008
Consistency of random forests
E Scornet, G Biau, JP Vert
Annals of Statistics 43 (4), 1716-1741, 2015
3052015
Classification of microarray data using gene networks
F Rapaport, A Zinovyev, M Dutreix, E Barillot, JP Vert
BMC bioinformatics 8 (1), 1-15, 2007
3012007
TIGRESS: trustful inference of gene regulation using stability selection
AC Haury, F Mordelet, P Vera-Licona, JP Vert
BMC systems biology 6 (1), 1-17, 2012
2942012
Protein network inference from multiple genomic data: a supervised approach
Y Yamanishi, JP Vert, M Kanehisa
Bioinformatics 20 (suppl_1), i363-i370, 2004
2922004
A New Approach to Collaborative Filtering: Operator Estimation with Spectral Regularization.
J Abernethy, F Bach, T Evgeniou, JP Vert
Journal of Machine Learning Research 10 (3), 2009
2782009
An accurate and interpretable model for siRNA efficacy prediction
JP Vert, N Foveau, C Lajaunie, Y Vandenbrouck
BMC bioinformatics 7 (1), 1-17, 2006
2732006
Graph kernels based on tree patterns for molecules
P Mahé, JP Vert
Machine learning 75 (1), 3-35, 2009
2682009
Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization
V Boeva, A Zinovyev, K Bleakley, JP Vert, I Janoueix-Lerosey, O Delattre, ...
Bioinformatics 27 (2), 268-269, 2011
2532011
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