Jean-Philippe Vert
Jean-Philippe Vert
Google Brain / Mines ParisTech
Adresse e-mail validée de mines-paristech.fr - Page d'accueil
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Wisdom of crowds for robust gene network inference
D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ...
Nature methods 9 (8), 796-804, 2012
13782012
Group lasso with overlap and graph lasso
L Jacob, G Obozinski, JP Vert
Proceedings of the 26th annual international conference on machine learning …, 2009
9892009
Kernel methods in computational biology
B Schölkopf, K Tsuda, JP Vert
MIT press, 2004
8672004
HiC-Pro: an optimized and flexible pipeline for Hi-C data processing
N Servant, N Varoquaux, BR Lajoie, E Viara, CJ Chen, JP Vert, E Heard, ...
Genome biology 16 (1), 1-11, 2015
6942015
A community effort to assess and improve drug sensitivity prediction algorithms
Nature Biotechnology 32, 1202-1212, 2014
5272014
Clustered multitask learning: A convex relaxation
L Jacob, F Bach, JP Vert
Advances in Neural Information Processing Systems 21, 2009
476*2009
Protein homology detection using string alignment kernels
H Saigo, JP Vert, N Ueda, T Akutsu
Bioinformatics 20 (11), 1682-1689, 2004
4682004
Support vector machine applications in computational biology
WS Noble
Kernel methods in computational biology 71, 92, 2004
3942004
A primer on kernel methods
JP Vert, K Tsuda, B Schölkopf
Kernel methods in computational biology 47, 35-70, 2004
3822004
A path following algorithm for the graph matching problem
M Zaslavskiy, F Bach, JP Vert
IEEE Transactions on Pattern Analysis and Machine Intelligence 31 (12), 2227 …, 2008
3812008
The influence of feature selection methods on accuracy, stability and interpretability of molecular signatures
AC Haury, P Gestraud, JP Vert
PloS one 6 (12), e28210, 2011
3612011
Protein-ligand interaction prediction: an improved chemogenomics approach
L Jacob, JP Vert
Bioinformatics 24 (19), 2149-2156, 2008
3262008
Consistency of random forests
E Scornet, G Biau, JP Vert
Annals of Statistics 43 (4), 1716-1741, 2015
3232015
Classification of microarray data using gene networks
F Rapaport, A Zinovyev, M Dutreix, E Barillot, JP Vert
BMC bioinformatics 8 (1), 1-15, 2007
3062007
TIGRESS: trustful inference of gene regulation using stability selection
AC Haury, F Mordelet, P Vera-Licona, JP Vert
BMC systems biology 6 (1), 1-17, 2012
3042012
A general and flexible method for signal extraction from single-cell RNA-seq data
D Risso, F Perraudeau, S Gribkova, S Dudoit, JP Vert
Nature communications 9 (1), 1-17, 2018
302*2018
Protein network inference from multiple genomic data: a supervised approach
Y Yamanishi, JP Vert, M Kanehisa
Bioinformatics 20 (suppl_1), i363-i370, 2004
2962004
A New Approach to Collaborative Filtering: Operator Estimation with Spectral Regularization.
J Abernethy, F Bach, T Evgeniou, JP Vert
Journal of Machine Learning Research 10 (3), 2009
2802009
An accurate and interpretable model for siRNA efficacy prediction
JP Vert, N Foveau, C Lajaunie, Y Vandenbrouck
BMC bioinformatics 7 (1), 1-17, 2006
2782006
Graph kernels based on tree patterns for molecules
P Mahé, JP Vert
Machine learning 75 (1), 3-35, 2009
2702009
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