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Jean-Philippe Vert
Jean-Philippe Vert
Owkin / PSL University
Adresse e-mail validée de owkin.com - Page d'accueil
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Wisdom of crowds for robust gene network inference
D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ...
Nature methods 9 (8), 796-804, 2012
17282012
HiC-Pro: an optimized and flexible pipeline for Hi-C data processing
N Servant, N Varoquaux, BR Lajoie, E Viara, CJ Chen, JP Vert, E Heard, ...
Genome biology 16 (1), 1-11, 2015
14862015
Group lasso with overlap and graph lasso
L Jacob, G Obozinski, JP Vert
Proceedings of the 26th annual international conference on machine learning …, 2009
11112009
Kernel methods in computational biology
B Schölkopf, K Tsuda, JPV Vert
MIT press, 2004
10422004
A community effort to assess and improve drug sensitivity prediction algorithms
Nature Biotechnology 32, 1202-1212, 2014
7082014
A general and flexible method for signal extraction from single-cell RNA-seq data
D Risso, F Perraudeau, S Gribkova, S Dudoit, JP Vert
Nature communications 9 (1), 284, 2018
5752018
A primer on kernel methods
JP Vert, K Tsuda, B Schölkopf
Kernel Methods in Computational Biology, 35-70, 2004
5662004
Clustered multitask learning: A convex relaxation
L Jacob, F Bach, JP Vert
Advances in Neural Information Processing Systems 21, 2009
561*2009
Consistency of random forests
E Scornet, G Biau, JP Vert
Annals of Statistics 43 (4), 1716-1741, 2015
5452015
Protein homology detection using string alignment kernels
H Saigo, JP Vert, N Ueda, T Akutsu
Bioinformatics 20 (11), 1682-1689, 2004
4972004
The influence of feature selection methods on accuracy, stability and interpretability of molecular signatures
AC Haury, P Gestraud, JP Vert
PloS one 6 (12), e28210, 2011
4572011
A path following algorithm for the graph matching problem
M Zaslavskiy, F Bach, JP Vert
IEEE Transactions on Pattern Analysis and Machine Intelligence 31 (12), 2227 …, 2008
4522008
TIGRESS: trustful inference of gene regulation using stability selection
AC Haury, F Mordelet, P Vera-Licona, JP Vert
BMC systems biology 6 (1), 1-17, 2012
4342012
Protein-ligand interaction prediction: an improved chemogenomics approach
L Jacob, JP Vert
bioinformatics 24 (19), 2149-2156, 2008
4072008
An accurate and interpretable model for siRNA efficacy prediction
JP Vert, N Foveau, C Lajaunie, Y Vandenbrouck
BMC bioinformatics 7 (1), 1-17, 2006
3332006
Classification of microarray data using gene networks
F Rapaport, A Zinovyev, M Dutreix, E Barillot, JP Vert
BMC bioinformatics 8, 1-15, 2007
3302007
Clusterpath an algorithm for clustering using convex fusion penalties
TD Hocking, A Joulin, F Bach, JP Vert
28th international conference on machine learning, 1, 2011
3192011
Protein network inference from multiple genomic data: a supervised approach
Y Yamanishi, JP Vert, M Kanehisa
Bioinformatics 20 (suppl_1), i363-i370, 2004
3102004
Graph kernels based on tree patterns for molecules
P Mahé, JP Vert
Machine learning 75 (1), 3-35, 2009
3022009
A bagging SVM to learn from positive and unlabeled examples
F Mordelet, JP Vert
Pattern Recognition Letters 37, 201-209, 2014
3012014
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