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Jean-Philippe Vert
Jean-Philippe Vert
Owkin / PSL University
Adresse e-mail validée de owkin.com - Page d'accueil
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HiC-Pro: an optimized and flexible pipeline for Hi-C data processing
N Servant, N Varoquaux, BR Lajoie, E Viara, CJ Chen, JP Vert, E Heard, ...
Genome biology 16, 1-11, 2015
19052015
Wisdom of crowds for robust gene network inference
D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ...
Nature methods 9 (8), 796-804, 2012
18342012
Group lasso with overlap and graph lasso
L Jacob, G Obozinski, JP Vert
Proceedings of the 26th annual international conference on machine learning …, 2009
11592009
Kernel methods in computational biology
B Schölkopf, K Tsuda, JPV Vert
MIT press, 2004
10672004
A community effort to assess and improve drug sensitivity prediction algorithms
Nature Biotechnology 32, 1202-1212, 2014
7862014
Consistency of random forests
E Scornet, G Biau, JP Vert
Annals of Statistics 43 (4), 1716-1741, 2015
6902015
A general and flexible method for signal extraction from single-cell RNA-seq data
D Risso, F Perraudeau, S Gribkova, S Dudoit, JP Vert
Nature communications 9 (1), 284, 2018
670*2018
A primer on kernel methods
JP Vert, K Tsuda, B Schölkopf
Kernel Methods in Computational Biology, 35-70, 2004
6262004
Clustered multitask learning: A convex relaxation
L Jacob, F Bach, JP Vert
Advances in Neural Information Processing Systems 21, 2009
584*2009
Protein homology detection using string alignment kernels
H Saigo, JP Vert, N Ueda, T Akutsu
Bioinformatics 20 (11), 1682-1689, 2004
5072004
TIGRESS: trustful inference of gene regulation using stability selection
AC Haury, F Mordelet, P Vera-Licona, JP Vert
BMC systems biology 6, 1-17, 2012
4872012
A path following algorithm for the graph matching problem
M Zaslavskiy, F Bach, JP Vert
IEEE Transactions on Pattern Analysis and Machine Intelligence 31 (12), 2227 …, 2008
4802008
The influence of feature selection methods on accuracy, stability and interpretability of molecular signatures
AC Haury, P Gestraud, JP Vert
PloS one 6 (12), e28210, 2011
4782011
Protein-ligand interaction prediction: an improved chemogenomics approach
L Jacob, JP Vert
bioinformatics 24 (19), 2149-2156, 2008
4292008
An accurate and interpretable model for siRNA efficacy prediction
JP Vert, N Foveau, C Lajaunie, Y Vandenbrouck
BMC bioinformatics 7, 1-17, 2006
3612006
A bagging SVM to learn from positive and unlabeled examples
F Mordelet, JP Vert
Pattern Recognition Letters 37, 201-209, 2014
3572014
Clusterpath an algorithm for clustering using convex fusion penalties
TD Hocking, A Joulin, F Bach, JP Vert
28th international conference on machine learning, 1, 2011
3462011
Classification of microarray data using gene networks
F Rapaport, A Zinovyev, M Dutreix, E Barillot, JP Vert
BMC bioinformatics 8, 1-15, 2007
3372007
A kernel for time series based on global alignments
M Cuturi, JP Vert, O Birkenes, T Matsui
2007 IEEE International Conference on Acoustics, Speech and Signal …, 2007
3262007
Protein network inference from multiple genomic data: a supervised approach
Y Yamanishi, JP Vert, M Kanehisa
Bioinformatics 20 (suppl_1), i363-i370, 2004
3142004
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