|Understanding multicellular function and disease with human tissue-specific networks|
CS Greene, A Krishnan, AK Wong, E Ricciotti, RA Zelaya, ...
Nature genetics 47 (6), 569-576, 2015
|Coat variation in the domestic dog is governed by variants in three genes|
E Cadieu, MW Neff, P Quignon, K Walsh, K Chase, HG Parker, ...
Science 326 (5949), 150, 2009
|Tracking footprints of artificial selection in the dog genome|
JM Akey, AL Ruhe, DT Akey, AK Wong, CF Connelly, J Madeoy, ...
Proceedings of the National Academy of Sciences 107 (3), 1160-1165, 2010
|Breed distribution and history of canine mdr1-1Δ, a pharmacogenetic mutation that marks the emergence of breeds from the collie lineage|
MW Neff, KR Robertson, AK Wong, N Safra, KW Broman, M Slatkin, ...
Proceedings of the National Academy of Sciences of the United States of …, 2004
|Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder|
A Krishnan, R Zhang, V Yao, CL Theesfeld, AK Wong, A Tadych, ...
Nature neuroscience 19 (11), 1454-1462, 2016
|Deep learning sequence-based ab initio prediction of variant effects on expression and disease risk|
J Zhou, CL Theesfeld, K Yao, KM Chen, AK Wong, OG Troyanskaya
Nature genetics 50 (8), 1171-1179, 2018
|Tissue-specific functional networks for prioritizing phenotype and disease genes|
Y Guan, D Gorenshteyn, M Burmeister, AK Wong, JC Schimenti, ...
PLoS Comput Biol 8 (9), e1002694, 2012
|IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks|
AK Wong, CY Park, CS Greene, LA Bongo, Y Guan, OG Troyanskaya
Nucleic acids research 40 (W1), W484-W490, 2012
|A comprehensive linkage map of the dog genome|
AK Wong, AL Ruhe, BL Dumont, KR Robertson, G Guerrero, SM Shull, ...
Genetics 184 (2), 595, 2010
|Targeted exploration and analysis of large cross-platform human transcriptomic compendia|
Q Zhu, AK Wong, A Krishnan, MR Aure, A Tadych, R Zhang, DC Corney, ...
Nature methods 12 (3), 211-214, 2015
|Whole-genome deep-learning analysis identifies contribution of noncoding mutations to autism risk|
J Zhou, CY Park, CL Theesfeld, AK Wong, Y Yuan, C Scheckel, JJ Fak, ...
Nature genetics 51 (6), 973-980, 2019
|Necrotizing meningoencephalitis of Pug dogs associates with dog leukocyte antigen class II and resembles acute variant forms of multiple sclerosis|
KA Greer, AK Wong, H Liu, TR Famula, NC Pedersen, A Ruhe, M Wallace, ...
Tissue Antigens 76 (2), 110-118, 2010
|Functional knowledge transfer for high-accuracy prediction of under-studied biological processes|
CY Park, AK Wong, CS Greene, J Rowland, Y Guan, LA Bongo, ...
PLoS Comput Biol 9 (3), e1002957, 2013
|Interactive big data resource to elucidate human immune pathways and diseases|
D Gorenshteyn, E Zaslavsky, M Fribourg, CY Park, AK Wong, A Tadych, ...
Immunity 43 (3), 605-614, 2015
|IMP 2.0: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks|
AK Wong, A Krishnan, V Yao, A Tadych, OG Troyanskaya
Nucleic acids research 43 (W1), W128-W133, 2015
|A de novo mutation in KIT causes white spotting in a subpopulation of German Shepherd dogs|
AK Wong, AL Ruhe, KR Robertson, ER Loew, DC Williams, MW Neff
Animal Genetics, 2012
|An ADAMTSL2 founder mutation causes Musladin-Lueke Syndrome, a heritable disorder of beagle dogs, featuring stiff skin and joint contractures|
HL Bader, AL Ruhe, LW Wang, AK Wong, KF Walsh, RA Packer, ...
PloS one 5 (9), e12817, 2010
|Network-based analysis of genetic variants associated with hippocampal volume in Alzheimer’s disease: a study of ADNI cohorts|
A Song, J Yan, S Kim, SL Risacher, AK Wong, AJ Saykin, L Shen, ...
BioData mining 9 (1), 3, 2016
|Tissue-aware data integration approach for the inference of pathway interactions in metazoan organisms|
CY Park, A Krishnan, Q Zhu, AK Wong, YS Lee, OG Troyanskaya
Bioinformatics 31 (7), 1093-1101, 2015
|GIANT 2.0: genome-scale integrated analysis of gene networks in tissues|
AK Wong, A Krishnan, OG Troyanskaya
Nucleic acids research 46 (W1), W65-W70, 2018