| Quorum sensing inhibition in Pseudomonas aeruginosa biofilms: new insights through network mining M Pérez-Pérez, P Jorge, G Pérez Rodríguez, MO Pereira, A Lourenço Biofouling 33 (2), 128-142, 2017 | 80 | 2017 |
| From amino acid sequence to bioactivity: The biomedical potential of antitumor peptides A Blanco‐Míguez, A Gutiérrez‐Jácome, M Pérez‐Pérez, ... Protein Science 25 (6), 1084-1095, 2016 | 71 | 2016 |
| Overview of the CHEMDNER patents task M Krallinger, O Rabal, A Lourenço, MP Perez, GP Rodriguez, M Vazquez, ... Proceedings of the fifth BioCreative challenge evaluation workshop, 63-75, 2015 | 67 | 2015 |
| Using twitter to understand the human bowel disease community: Exploratory analysis of key topics M Pérez-Pérez, G Pérez-Rodríguez, F Fdez-Riverola, A Lourenço Journal of medical Internet research 21 (8), e12610, 2019 | 50 | 2019 |
| Marky: a tool supporting annotation consistency in multi-user and iterative document annotation projects M Pérez-Pérez, D Glez-Peña, F Fdez-Riverola, A Lourenço Computer methods and programs in biomedicine 118 (2), 242-251, 2015 | 32 | 2015 |
| Evaluation of chemical and gene/protein entity recognition systems at BioCreative V. 5: the CEMP and GPRO patents tracks M Pérez-Pérez, O Rabal, G Pérez-Rodríguez, M Vazquez, ... | 30 | 2017 |
| A network perspective on antimicrobial peptide combination therapies: the potential of colistin, polymyxin B and nisin P Jorge, M Pérez-Pérez, GP Rodríguez, MO Pereira, A Lourenço International journal of antimicrobial agents 49 (6), 668-676, 2017 | 26 | 2017 |
| The Markyt visualisation, prediction and benchmark platform for chemical and gene entity recognition at BioCreative/CHEMDNER challenge M Pérez-Pérez, G Pérez-Rodríguez, O Rabal, M Vazquez, J Oyarzabal, ... Database 2016, baw120, 2016 | 17 | 2016 |
| Agent-based model of diffusion of N-acyl homoserine lactones in a multicellular environment of Pseudomonas aeruginosa and Candida albicans G Pérez-Rodríguez, S Dias, M Pérez-Pérez, F Fdez-Riverola, NF Azevedo, ... Biofouling 34 (3), 335-345, 2018 | 16 | 2018 |
| The biocreative v. 5 evaluation workshop: tasks, organization, sessions and topics M Krallinger, M Pérez-Pérez, G Pérez-Rodríguez, A Blanco-Míguez, ... | 16 | 2017 |
| Benchmarking biomedical text mining web servers at BioCreative V. 5: the technical interoperability and performance of annotation servers–TIPS track M Pérez-Pérez, G Pérez-Rodríguez, A Blanco-Míguez, F Fdez-Riverola, ... Proceedings of the BioCreative 5, 12-21, 2017 | 15 | 2017 |
| Computational resources and strategies to construct single-molecule metabolic models of microbial cells D Gameiro, M Pérez-Pérez, G Pérez-Rodríguez, G Monteiro, NF Azevedo, ... Briefings in bioinformatics 17 (5), 863-876, 2016 | 14 | 2016 |
| High performance computing for three-dimensional agent-based molecular models G Pérez-Rodríguez, M Pérez-Pérez, F Fdez-Riverola, A Lourenço Journal of Molecular Graphics and Modelling 68, 68-77, 2016 | 14 | 2016 |
| Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach TRR Grainha, PAS Jorge, M Pérez-Pérez, G Pérez Rodríguez, ... FEMS yeast research 18 (3), foy022, 2018 | 13 | 2018 |
| Construction of antimicrobial peptide-drug combination networks from scientific literature based on a semi-automated curation workflow P Jorge, M Pérez-Pérez, G Pérez Rodríguez, F Fdez-Riverola, MO Pereira, ... Database 2016, baw143, 2016 | 13 | 2016 |
| Online visibility of software-related web sites: the case of biomedical text mining tools G Pérez-Rodríguez, M Pérez-Pérez, F Fdez-Riverola, A Lourenço Information Processing & Management 56 (3), 565-583, 2019 | 12 | 2019 |
| The Biomedical Abbreviation Recognition and Resolution (BARR) track: benchmarking, evaluation and importance of abbreviation recognition systems applied to Spanish biomedical … A Intxaurrondo, M Pérez-Pérez, G Pérez-Rodríguez, JA López-Martín, ... | 12 | 2017 |
| Reconstruction of the network of experimentally validated AMP-drug combinations against Pseudomonas aeruginosa infections P Jorge, M Perez-Perez, G Pérez Rodríguez, F Fdez-Riverola, MO Pereira, ... Current Bioinformatics 11 (5), 523-530, 2016 | 9 | 2016 |
| Marky: a lightweight web tracking tool for document annotation M Pérez-Pérez, D Glez-Peña, F Fdez-Riverola, A Lourenço 8th International Conference on Practical Applications of Computational …, 2014 | 9 | 2014 |
| A deep learning relation extraction approach to support a biomedical semi-automatic curation task: the case of the gluten bibliome M Pérez-Pérez, T Ferreira, G Igrejas, F Fdez-Riverola Expert Systems with Applications 195, 116616, 2022 | 8 | 2022 |
