| The transcription factor titration effect dictates level of gene expression RC Brewster, FM Weinert, HG Garcia, D Song, M Rydenfelt, R Phillips Cell 156 (6), 1312-1323, 2014 | 263 | 2014 |
| Classification of gene signatures for their information value and functional redundancy L Cantini, L Calzone, L Martignetti, M Rydenfelt, N Blüthgen, E Barillot, ... NPJ systems biology and applications 4 (1), 2, 2017 | 63 | 2017 |
| Scaling of gene expression with transcription-factor fugacity FM Weinert, RC Brewster, M Rydenfelt, R Phillips, WK Kegel Physical review letters 113 (25), 258101, 2014 | 53 | 2014 |
| Statistical mechanical model of coupled transcription from multiple promoters due to transcription factor titration M Rydenfelt, RS Cox III, H Garcia, R Phillips Physical Review E 89 (1), 012702, 2014 | 50 | 2014 |
| The influence of promoter architectures and regulatory motifs on gene expression in Escherichia coli M Rydenfelt, HG Garcia, RS Cox III, R Phillips PLoS one 9 (12), e114347, 2014 | 41 | 2014 |
| SPEED2: inferring upstream pathway activity from differential gene expression M Rydenfelt, B Klinger, M Klünemann, N Blüthgen Nucleic acids research 48 (W1), W307-W312, 2020 | 35 | 2020 |
| Oncogenic β-catenin and PIK3CA instruct network states and cancer phenotypes in intestinal organoids P Riemer, M Rydenfelt, M Marks, K van Eunen, K Thedieck, BG Herrmann, ... Journal of Cell Biology 216 (6), 1567-1577, 2017 | 32 | 2017 |
| The cancer cell proteome and transcriptome predicts sensitivity to targeted and cytotoxic drugs M Rydenfelt, M Wongchenko, B Klinger, Y Yan, N Blüthgen Life Science Alliance 2 (4), 2019 | 12 | 2019 |
| In vivo and in vitro consistency of thermodynamic models for transcription regulation J Landman, RN Georgiev, M Rydenfelt, WK Kegel Physical Review Research 1 (3), 033094, 2019 | 5 | 2019 |
| Tracking Price Trends Using User–Product Interaction Data From a Price Comparison Service M Rydenfelt International Conference on Applied Economics, 393-408, 2021 | | 2021 |
| The Combinatorics of Transcriptional Regulation M Rydenfelt California Institute of Technology, 2014 | | 2014 |
