Charles Ofria
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The evolutionary origin of complex features
RE Lenski, C Ofria, RT Pennock, C Adami
Nature 423 (6936), 139-144, 2003
Perspective: evolution and detection of genetic robustness
JAGM De Visser, J Hermisson, GP Wagner, LA Meyers, ...
Evolution 57 (9), 1959-1972, 2003
Evolution of digital organisms at high mutation rates leads to survival of the flattest
CO Wilke, JL Wang, C Ofria, RE Lenski, C Adami
Nature 412 (6844), 331-333, 2001
Evolution of biological complexity
C Adami, C Ofria, TC Collier
Proceedings of the National Academy of Sciences 97 (9), 4463-4468, 2000
Avida: A software platform for research in computational evolutionary biology
C Ofria, CO Wilke
Artificial life 10 (2), 191-229, 2004
Genome complexity, robustness and genetic interactions in digital organisms
RE Lenski, C Ofria, TC Collier, C Adami
Nature 400 (6745), 661-664, 1999
Balancing robustness and evolvability
RE Lenski, JE Barrick, C Ofria
PLoS biology 4 (12), e428, 2006
Evolving coordinated quadruped gaits with the HyperNEAT generative encoding
J Clune, BE Beckmann, C Ofria, RT Pennock
2009 iEEE congress on evolutionary computation, 2764-2771, 2009
The surprising creativity of digital evolution: A collection of anecdotes from the evolutionary computation and artificial life research communities
J Lehman, J Clune, D Misevic, C Adami, L Altenberg, J Beaulieu, ...
Artificial life 26 (2), 274-306, 2020
On the performance of indirect encoding across the continuum of regularity
J Clune, KO Stanley, RT Pennock, C Ofria
IEEE Transactions on Evolutionary Computation 15 (3), 346-367, 2011
Adaptive radiation from resource competition in digital organisms
SS Chow, CO Wilke, C Ofria, RE Lenski, C Adami
Science 305 (5680), 84-86, 2004
Sexual reproduction reshapes the genetic architecture of digital organisms
D Misevic, C Ofria, RE Lenski
Proceedings of the Royal Society B: Biological Sciences 273 (1585), 457-464, 2006
Natural selection fails to optimize mutation rates for long-term adaptation on rugged fitness landscapes
J Clune, D Misevic, C Ofria, RE Lenski, SF Elena, R Sanjuán
PLoS Computational Biology 4 (9), e1000187, 2008
Task-switching costs promote the evolution of division of labor and shifts in individuality
HJ Goldsby, A Dornhaus, B Kerr, C Ofria
Proceedings of the National Academy of Sciences 109 (34), 13686-13691, 2012
Open-ended evolution: Perspectives from the OEE workshop in York
T Taylor, M Bedau, A Channon, D Ackley, W Banzhaf, G Beslon, E Dolson, ...
Artificial life 22 (3), 408-423, 2016
Coevolution drives the emergence of complex traits and promotes evolvability
L Zaman, JR Meyer, S Devangam, DM Bryson, RE Lenski, C Ofria
PLoS Biology 12 (12), e1002023, 2014
Distributed cooperative caching in social wireless networks
M Taghizadeh, K Micinski, S Biswas, C Ofria, E Torng
IEEE Transactions on Mobile Computing 12 (6), 1037-1053, 2012
Experiments on the role of deleterious mutations as stepping stones in adaptive evolution
AW Covert III, RE Lenski, CO Wilke, C Ofria
Proceedings of the National Academy of Sciences 110 (34), E3171-E3178, 2013
Effects of population size and mutation rate on the evolution of mutational robustness
SF Elena, CO Wilke, C Ofria, RE Lenski
Evolution 61 (3), 666-674, 2007
Evolving digital ecological networks
MA Fortuna, L Zaman, AP Wagner, C Ofria
PLoS computational biology 9 (3), e1002928, 2013
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