| The biological and clinical significance of emerging SARS-CoV-2 variants K Tao, PL Tzou, J Nouhin, RK Gupta, T de Oliveira, SL Kosakovsky Pond, ... Nature Reviews Genetics 22 (12), 757-773, 2021 | 966 | 2021 |
| A systematic review of the genetic mechanisms of dolutegravir resistance SY Rhee, PM Grant, PL Tzou, G Barrow, PR Harrigan, JPA Ioannidis, ... Journal of Antimicrobial Chemotherapy 74 (11), 3135-3149, 2019 | 128 | 2019 |
| SARS-CoV-2 antiviral therapy K Tao, PL Tzou, J Nouhin, H Bonilla, P Jagannathan, RW Shafer Clinical microbiology reviews 34 (4), e00109-21, 2021 | 96 | 2021 |
| Coronavirus Resistance Database (CoV-RDB): SARS-CoV-2 susceptibility to monoclonal antibodies, convalescent plasma, and plasma from vaccinated persons PL Tzou, K Tao, SLK Pond, RW Shafer Plos one 17 (3), e0261045, 2022 | 76 | 2022 |
| Comparison of an In Vitro Diagnostic Next-Generation Sequencing Assay with Sanger Sequencing for HIV-1 Genotypic Resistance Testing PL Tzou, P Ariyaratne, V Varghese, C Lee, E Rakhmanaliev, C Villy, ... Journal of clinical microbiology 56 (6), 10.1128/jcm. 00105-18, 2018 | 76 | 2018 |
| Coronavirus antiviral research database (CoV-RDB): an online database designed to facilitate comparisons between candidate anti-coronavirus compounds PL Tzou, K Tao, J Nouhin, SY Rhee, BD Hu, S Pai, N Parkin, RW Shafer Viruses 12 (9), 1006, 2020 | 68 | 2020 |
| Kosakovsky Pond SL, Fera D, Shafer RW K Tao, PL Tzou, J Nouhin, RK Gupta, T de Oliveira The biological and clinical significance of emerging SARS-CoV-2 variants …, 2021 | 66 | 2021 |
| Susceptibility of SARS-CoV-2 Omicron variants to therapeutic monoclonal antibodies: systematic review and meta-analysis K Tao, PL Tzou, SL Kosakovsky Pond, JPA Ioannidis, RW Shafer Microbiology Spectrum 10 (4), e00926-22, 2022 | 63 | 2022 |
| Integrase strand transfer inhibitor (INSTI)-resistance mutations for the surveillance of transmitted HIV-1 drug resistance PL Tzou, SY Rhee, D Descamps, DS Clutter, B Hare, O Mor, M Grude, ... Journal of Antimicrobial Chemotherapy 75 (1), 170-182, 2020 | 58 | 2020 |
| Kosakovsky Pond, SL, Ioannidis, JPA & Shafer, RW Susceptibility of SARS-CoV-2 Omicron variants to therapeutic monoclonal antibodies: systematic review and meta-analysis K Tao, PL Tzou Microbiol Spectr 10 (4), e0092622, 2022 | 49 | 2022 |
| Collaborative update of a rule-based expert system for HIV-1 genotypic resistance test interpretation R Paredes, PL Tzou, G Van Zyl, G Barrow, R Camacho, S Carmona, ... PLoS One 12 (7), e0181357, 2017 | 36 | 2017 |
| Expanded spectrum of antiretroviral-selected mutations in human immunodeficiency virus type 2 PL Tzou, D Descamps, SY Rhee, DN Raugi, C Charpentier, N Taveira, ... The Journal of Infectious Diseases 221 (12), 1962-1972, 2020 | 19 | 2020 |
| Analysis of unusual and signature APOBEC-mutations in HIV-1 pol next-generation sequences PL Tzou, SL Kosakovsky Pond, S Avila-Rios, SP Holmes, R Kantor, ... PLoS One 15 (2), e0225352, 2020 | 18 | 2020 |
| Prospective evaluation of the vela diagnostics next-generation sequencing platform for HIV-1 genotypic resistance testing J Weber, I Volkova, MK Sahoo, PL Tzou, RW Shafer, BA Pinsky The Journal of Molecular Diagnostics 21 (6), 961-970, 2019 | 17 | 2019 |
| Evolution of gag and gp41 in Patients Receiving Ritonavir-Boosted Protease Inhibitors J Manasa, V Varghese, SLK Pond, SY Rhee, PL Tzou, WJ Fessel, ... Scientific reports 7 (1), 11559, 2017 | 14 | 2017 |
| Temporal trends in HIV-1 mutations used for the surveillance of transmitted drug resistance SY Rhee, PL Tzou, RW Shafer Viruses 13 (5), 879, 2021 | 12 | 2021 |
| Multiplex solid-phase melt curve analysis for the point-of-care detection of HIV-1 drug resistance DS Clutter, G Mazarei, R Sinha, J Manasa, J Nouhin, E LaPrade, ... The Journal of Molecular Diagnostics 21 (4), 580-592, 2019 | 10 | 2019 |
| NucAmino: a nucleotide to amino acid alignment optimized for virus gene sequences PL Tzou, X Huang, RW Shafer BMC bioinformatics 18, 1-6, 2017 | 8 | 2017 |
| Sierra SARS-CoV-2 sequence and antiviral resistance analysis program PL Tzou, K Tao, MK Sahoo, SLK Pond, BA Pinsky, RW Shafer Journal of Clinical Virology 157, 105323, 2022 | 5 | 2022 |
| Amino Acid Prevalence of HIV-1 pol Mutations by Direct Polymerase Chain Reaction and Single Genome Sequencing PL Tzou, SY Rhee, RW Shafer AIDS Research and Human Retroviruses 35 (10), 924-929, 2019 | 2 | 2019 |
Robert ShaferProfessor of Medicine, Stanford UniversityVerified email at stanford.edu
