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Jotun Hein
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Gene genealogies, variation and evolution: a primer in coalescent theory
J Hein, M Schierup, C Wiuf
Oxford University Press, USA, 2004
7872004
Consequences of recombination on traditional phylogenetic analysis
MH Schierup, J Hein
Genetics 156 (2), 879-891, 2000
6522000
Pfold: RNA secondary structure prediction using stochastic context-free grammars
B Knudsen, J Hein
Nucleic acids research 31 (13), 3423-3428, 2003
6142003
[39] Unified approach to alignment and phylogenies
J Hein
Academic Press 183, 626-645, 1990
5911990
RNA secondary structure prediction using stochastic context-free grammars and evolutionary history.
B Knudsen, J Hein
Bioinformatics (Oxford, England) 15 (6), 446-454, 1999
4601999
Reconstructing evolution of sequences subject to recombination using parsimony
J Hein
Mathematical biosciences 98 (2), 185-200, 1990
3411990
A heuristic method to reconstruct the history of sequences subject to recombination
J Hein
Journal of Molecular Evolution 36, 396-405, 1993
3161993
On the complexity of comparing evolutionary trees
J Hein, T Jiang, L Wang, K Zhang
Discrete Applied Mathematics 71 (1-3), 153-169, 1996
2821996
A new method that simultaneously aligns and reconstructs ancestral sequences for any number of homologous sequences, when the phylogeny is given.
J Hein
Molecular Biology and Evolution 6 (6), 649-668, 1989
2291989
Genome-wide identification of human functional DNA using a neutral indel model
G Lunter, CP Ponting, J Hein
PLoS computational biology 2 (1), e5, 2006
2212006
The genetic diversity of European type PRRSV is similar to that of the North American type but is geographically skewed within Europe
R Forsberg, T Storgaard, HS Nielsen, MB Oleksiewicz, P Cordioli, G Sala, ...
Virology 299 (1), 38-47, 2002
2162002
Recombination as a point process along sequences
C Wiuf, J Hein
Theoretical population biology 55 (3), 248-259, 1999
2161999
Bayesian coestimation of phylogeny and sequence alignment
G Lunter, I Miklós, A Drummond, JL Jensen, J Hein
Bmc Bioinformatics 6, 1-10, 2005
2092005
Using biological networks to search for interacting loci in genome-wide association studies
M Emily, T Mailund, J Hein, L Schauser, MH Schierup
European Journal of Human Genetics 17 (10), 1231-1240, 2009
1932009
Autocatalytic sets and the origin of life
W Hordijk, J Hein, M Steel
Entropy 12 (7), 1733-1742, 2010
1862010
Uncertainty in homology inferences: assessing and improving genomic sequence alignment
G Lunter, A Rocco, N Mimouni, A Heger, A Caldeira, J Hein
Genome research 18 (2), 298-309, 2008
1752008
The coalescent with gene conversion
C Wiuf, J Hein
Genetics 155 (1), 451-462, 2000
1622000
Gene finding with a hidden Markov model of genome structure and evolution
JS Pedersen, J Hein
Bioinformatics 19 (2), 219-227, 2003
1592003
Recombination and the molecular clock
MH Schierup, J Hein
Molecular biology and evolution 17 (10), 1578-1579, 2000
1462000
A simulation study of the reliability of recombination detection methods
C Wiuf, T Christensen, J Hein
Molecular Biology and Evolution 18 (10), 1929-1939, 2001
1452001
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