| Metformin is associated with higher relative abundance of mucin-degrading Akkermansia muciniphila and several short-chain fatty acid–producing microbiota in the gut J De La Cuesta-Zuluaga, NT Mueller, V Corrales-Agudelo, ... Diabetes Care 40 (1), 54-62, 2017 | 644 | 2017 |
| Higher fecal short-chain fatty acid levels are associated with gut microbiome dysbiosis, obesity, hypertension and cardiometabolic disease risk factors J de la Cuesta-Zuluaga, NT Mueller, R Álvarez-Quintero, ... Nutrients 11 (1), 2019 | 423 | 2019 |
| Age-and Sex-Dependent Patterns of Gut Microbial Diversity in Human Adults J de la Cuesta-Zuluaga, ST Kelley, Y Chen, JS Escobar, NT Mueller, ... mSystems 4 (4), e00261-19, 2019 | 246 | 2019 |
| Gut microbiota is associated with obesity and cardiometabolic disease in a population in the midst of Westernization J de la Cuesta-Zuluaga, V Corrales-Agudelo, EP Velásquez-Mejía, ... Scientific reports 8 (1), 11356, 2018 | 98 | 2018 |
| Syntrophy via Interspecies H2 Transfer between Christensenella and Methanobrevibacter Underlies Their Global Cooccurrence in the Human Gut A Ruaud, S Esquivel-Elizondo, J de la Cuesta-Zuluaga, JL Waters, ... MBio 11 (1), e03235-19, 2020 | 82 | 2020 |
| Large-Scale Metagenome Assembly Reveals Novel Animal-Associated Microbial Genomes, Biosynthetic Gene Clusters, and Other Genetic Diversity ND Youngblut, J de la Cuesta-Zuluaga, GH Reischer, S Dauser, ... mSystems 5 (6), e01045-20, 2020 | 61 | 2020 |
| Body size phenotypes comprehensively assess cardiometabolic risk and refine the association between obesity and gut microbiota J De La Cuesta-Zuluaga, V Corrales-Agudelo, JA Carmona, JM Abad, ... International Journal of Obesity 42 (3), 424-432, 2018 | 54 | 2018 |
| Impact of DNA extraction, sample dilution, and reagent contamination on 16S rRNA gene sequencing of human feces EP Velásquez-Mejía, J de la Cuesta-Zuluaga, JS Escobar Applied microbiology and biotechnology 102 (1), 403-411, 2018 | 53 | 2018 |
| Considerations for optimizing microbiome analysis using a marker gene J de la Cuesta-Zuluaga, JS Escobar Frontiers in nutrition 3, 26, 2016 | 48 | 2016 |
| Struo: a pipeline for building custom databases for common metagenome profilers J De La Cuesta-Zuluaga, RE Ley, ND Youngblut Bioinformatics 36 (7), 2314-2315, 2020 | 30 | 2020 |
| Silent recognition of flagellins from human gut commensal bacteria by Toll-like receptor 5 SJ Clasen, MEW Bell, A Borbón, DH Lee, ZM Henseler, ... Science Immunology 8 (79), eabq7001, 2023 | 29 | 2023 |
| Genomic Insights into Adaptations of Trimethylamine-Utilizing Methanogens to Diverse Habitats, Including the Human Gut J De La Cuesta-Zuluaga, TD Spector, ND Youngblut, RE Ley Msystems 6 (1), e00939-20, 2021 | 25 | 2021 |
| Identification of the virB operon genes encoding the type IV secretion system, in Colombian Brucella canis isolates JJ De la Cuesta-Zuluaga, MM Sánchez-Jiménez, J Martínez-Garro, ... Veterinary microbiology 163 (1-2), 196-199, 2013 | 19 | 2013 |
| Gut microbiota composition explains more variance in the host cardiometabolic risk than genetic ancestry SJ Guzmán-Castañeda, EL Ortega-Vega, J de la Cuesta-Zuluaga, ... Gut Microbes 11 (2), 191-204, 2020 | 18 | 2020 |
| Diagnosis of human and canine Brucella canis infection: development and evaluation of indirect enzyme-linked immunosorbent assays using recombinant Brucella proteins MM Sánchez-Jiménez, JJ de la Cuesta Zuluaga, GM Garcia-Montoya, ... Heliyon 6 (7), e04393, 2020 | 10 | 2020 |
| Variants in genes of innate immunity, appetite control and energy metabolism are associated with host cardiometabolic health and gut microbiota composition EL Ortega-Vega, SJ Guzmán-Castañeda, O Campo, EP Velásquez-Mejía, ... Gut microbes 11 (3), 556-568, 2020 | 9 | 2020 |
| Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis X Liu, JL Sutter, J de la Cuesta-Zuluaga, JL Waters, ND Youngblut, ... International Journal of Systematic and Evolutionary Microbiology 71 (4), 2021 | 8 | 2021 |
| Genomic insights into adaptations of TMA-utilizing methanogens to diverse habitats including the human gut J de la Cuesta-Zuluaga, TD Spector, ND Youngblut, RE Ley bioRxiv, 2020 | 5 | 2020 |
| Incorporating genome‐based phylogeny and functional similarity into diversity assessments helps to resolve a global collection of human gut metagenomes ND Youngblut, J de la Cuesta‐Zuluaga, RE Ley Environmental microbiology 24 (9), 3966-3984, 2022 | 3 | 2022 |
| High-throughput anaerobic screening for identifying compounds acting against gut bacteria in monocultures or communities P Müller, J de la Cuesta-Zuluaga, M Kuhn, M Baghai Arassi, T Treis, ... Nature Protocols, 1-32, 2023 | 2 | 2023 |
