| Synthesis of phylogeny and taxonomy into a comprehensive tree of life CE Hinchliff, SA Smith, JF Allman, JG Burleigh, R Chaudhary, LM Coghill, ... Proceedings of the National Academy of Sciences 112 (41), 12764-12769, 2015 | 711 | 2015 |
| New World cattle show ancestry from multiple independent domestication events EJ McTavish, JE Decker, RD Schnabel, JF Taylor, DM Hillis Proceedings of the National Academy of Sciences 110 (15), E1398-E1406, 2013 | 220 | 2013 |
| How do SNP ascertainment schemes and population demographics affect inferences about population history? EJ McTavish, DM Hillis BMC genomics 16, 1-13, 2015 | 60 | 2015 |
| Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient A Stoltzfus, H Lapp, N Matasci, H Deus, B Sidlauskas, CM Zmasek, ... BMC bioinformatics 14, 1-17, 2013 | 47 | 2013 |
| Phylesystem: a git-based data store for community-curated phylogenetic estimates EJ McTavish, CE Hinchliff, JF Allman, JW Brown, KA Cranston, MT Holder, ... Bioinformatics 31 (17), 2794-2800, 2015 | 33 | 2015 |
| Landscape analyses using eDNA metabarcoding and Earth observation predict community biodiversity in California M Lin, AL Simons, RJ Harrigan, EE Curd, FD Schneider, DV Ruiz‐Ramos, ... Ecological Applications 31 (6), e02379, 2021 | 30 | 2021 |
| Color polymorphism is a driver of diversification in the lizard family Lacertidae KM Brock, EJ McTavish, DL Edwards Systematic Biology 71 (1), 24-39, 2022 | 26 | 2022 |
| How and why to build a unified tree of life EJ McTavish, BT Drew, B Redelings, KA Cranston BioEssays 39 (11), 1700114, 2017 | 24 | 2017 |
| A genomic approach for distinguishing between recent and ancient admixture as applied to cattle EJ McTavish, DM Hillis Journal of Heredity 105 (4), 445-456, 2014 | 24 | 2014 |
| TreeToReads-a pipeline for simulating raw reads from phylogenies EJ McTavish, J Pettengill, S Davis, H Rand, E Strain, M Allard, RE Timme BMC bioinformatics 18, 1-7, 2017 | 18 | 2017 |
| DateLife: leveraging databases and analytical tools to reveal the dated Tree of Life LLS Reyes, EJ McTavish, B O’Meara BioRxiv, 782094, 2019 | 12 | 2019 |
| Twisted trees and inconsistency of tree estimation when gaps are treated as missing data–The impact of model mis-specification in distance corrections EJ McTavish, M Steel, MT Holder Molecular phylogenetics and evolution 93, 289-295, 2015 | 12 | 2015 |
| OpenTree: A Python package for Accessing and Analyzing data from the Open Tree of Life EJ McTavish, LL Sánchez-Reyes, MT Holder Systematic Biology 70 (6), 1295-1301, 2021 | 7 | 2021 |
| Variation in flight morphology in a damselfly with female-limited polymorphism EJ MTavish, GK Smith, RF Guerrero, EJ Gering Evolutionary Ecology Research 14 (3), 325-341, 2012 | 5 | 2012 |
| A biodiversity composition map of California derived from environmental DNA metabarcoding and Earth observation M Lin, AL Simons, EE Curd, RJ Harrigan, FD Schneider, DV Ruiz-Ramos, ... BioRxiv, 2020.06. 19.160374, 2020 | 4 | 2020 |
| Leveraging shared ancestral variation to detect local introgression L Lopez Fang, D Peede, D Ortega-Del Vecchyo, EJ McTavish, ... Plos Genetics 20 (1), e1010155, 2024 | 2 | 2024 |
| Approachable case studies support learning and reproducibility in data science: An example from evolutionary biology LL Sanchez Reyes, EJ McTavish Journal of Statistics and Data Science Education 30 (3), 304-310, 2022 | 2 | 2022 |
| Rapid alignment updating with Extensiphy JT Field, AJ Abrams, JC Cartee, EJ McTavish Methods in Ecology and Evolution 13 (3), 682-693, 2022 | 2 | 2022 |
| Physcraper: a Python package for continually updated phylogenetic trees using the Open Tree of Life LL Sánchez-Reyes, M Kandziora, EJ McTavish BMC bioinformatics 22, 1-13, 2021 | 2 | 2021 |
| Physcraper: a python package for continual update of evolutionary estimates using the Open Tree of Life LLS Reyes, M Kandziora, EJ McTavish bioRxiv, 2020.09. 15.299156, 2020 | 2 | 2020 |
Jonathan A ReesRonin InstituteVerified email at mumble.net
