| Mitochondrial-nuclear co-evolution and its effects on OXPHOS activity and regulation D Bar-Yaacov, A Blumberg, D Mishmar Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1819 (9-10 …, 2012 | 128 | 2012 |
| Mitochondrial 16S rRNA is methylated by tRNA methyltransferase TRMT61B in all vertebrates D Bar-Yaacov, I Frumkin, Y Yashiro, T Chujo, Y Ishigami, Y Chemla, ... PLoS biology 14 (9), e1002557, 2016 | 118 | 2016 |
| Mito-nuclear co-evolution: the positive and negative sides of functional ancient mutations L Levin, A Blumberg, G Barshad, D Mishmar Frontiers in genetics 5, 448, 2014 | 98 | 2014 |
| Characterizing RNA stability genome-wide through combined analysis of PRO-seq and RNA-seq data A Blumberg, Y Zhao, YF Huang, N Dukler, EJ Rice, AG Chivu, K Krumholz, ... BMC biology 19, 1-17, 2021 | 59 | 2021 |
| Transcription factors bind negatively selected sites within human mtDNA genes A Blumberg, B Sri Sailaja, A Kundaje, L Levin, S Dadon, S Shmorak, ... Genome biology and evolution 6 (10), 2634-2646, 2014 | 48 | 2014 |
| Initiation of mtDNA transcription is followed by pausing, and diverges across human cell types and during evolution A Blumberg, EJ Rice, A Kundaje, CG Danko, D Mishmar Genome research 27 (3), 362-373, 2017 | 46 | 2017 |
| Human primitive brain displays negative mitochondrial-nuclear expression correlation of respiratory genes G Barshad, A Blumberg, T Cohen, D Mishmar Genome research 28 (7), 952-967, 2018 | 45 | 2018 |
| A common pattern of DNase I footprinting throughout the human mtDNA unveils clues for a chromatin-like organization A Blumberg, CG Danko, A Kundaje, D Mishmar Genome Research 28 (8), 1158-1168, 2018 | 22 | 2018 |
| mtDNA chromatin-like organization is gradually established during mammalian embryogenesis S Marom, A Blumberg, A Kundaje, D Mishmar Iscience 12, 141-151, 2019 | 17 | 2019 |
| A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei KS Rajan, H Madmoni, A Bashan, M Taoka, S Aryal, Y Nobe, T Doniger, ... Nature communications 14 (1), 7462, 2023 | 10 | 2023 |
| Correction: Mitochondrial 16S rRNA is methylated by tRNA methyltransferase TRMT61B in all vertebrates D Bar-Yaacov, I Frumkin, Y Yashiro, T Chujo, Y Ishigami, Y Chemla, ... PLoS Biology 15 (1), e1002594, 2017 | 4 | 2017 |
| Mitochondrial and nuclear genome coevolution A Blumberg, G Barshad, D Mishmar Encyclopedia of Evolutionary Biology, 19-26, 2016 | 2 | 2016 |
| Oxidative-phosphorylation genes from the mitochondrial and nuclear genomes co-express in all human tissues except for the ancient brain G Barshad, A Blumberg, D Mishmar bioRxiv, 136457, 2017 | 1 | 2017 |
| Corrigendum: Human primitive brain displays negative mitochondrial-nuclear expression correlation of respiratory genes G Barshad, A Blumberg, T Cohen, D Mishmar Genome Research 32 (8), 1626, 2022 | | 2022 |
| Corrigendum: Initiation of mtDNA transcription is followed by pausing, and diverges across human cell types and during evolution A Blumberg, EJ Rice, A Kundaje, CG Danko, D Mishmar Genome Research 29 (4), 710.1, 2019 | | 2019 |
| Identifying Novel Sequence Elements and Factors Regulating Human MtDNA Transcription A Blumberg Ben-Gurion University of the Negev, 2016 | | 2016 |
Anshul KundajeAssociate Professor, Dept. of Genetics, Dept. of Computer Science, Stanford UniversityVerified email at stanford.edu
