Julien Yann Dutheil

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Coauteurs

Mikkel Heide SchierupProfessor, Bioinformatics Research Centre, Aarhus UniversityAdresse e-mail validée de birc.au.dk
Eva StukenbrockMax Planck Institute Plön and Christian-Albrechts University of KielAdresse e-mail validée de evolbio.mpg.de
Nicolas GaltierCNRS - Université MontpellierAdresse e-mail validée de umontpellier.fr
Thomas MailundAssociate Professor of Bioinformatics, Aarhus UniversityAdresse e-mail validée de birc.au.dk
Asger HobolthProfessor, Department of Mathematics, Aarhus UniversityAdresse e-mail validée de math.au.dk
Regine KahmannProfessor of Genetics, Philipps Universitaet MarburgAdresse e-mail validée de mpi-marburg.mpg.de
Kasper MunchBioinformatics Research Centre, Aarhus UniversityAdresse e-mail validée de daimi.au.dk
Bastien BoussauLBBE, UMR 5558, CNRS researcher, Université de LyonAdresse e-mail validée de univ-lyon1.fr
Gustavo Valadares BarrosoUniversity of California, Los AngelesAdresse e-mail validée de g.ucla.edu
Emmanuel ParadisInstitut des Sciences de l'ÉvolutionAdresse e-mail validée de ird.fr
Claude julienMontpellierAdresse e-mail validée de univ-montp2.fr
Nataša PuzovićMax Planck Institute for Evolutionary BiologyAdresse e-mail validée de evolbio.mpg.de
Vincent Ranwez Professor at Montpellier SupAgroAdresse e-mail validée de supagro.inra.fr
Thomas BataillonProfessor, Bioinformatics Research Center , Aarhus UniversityAdresse e-mail validée de birc.au.dk
Ana Filipa MoutinhoUniversity of SussexAdresse e-mail validée de sussex.ac.uk
khalid belkhiruniversité de montpellier, CNRSAdresse e-mail validée de univ-montp2.fr
Jonathan RomiguierInstitut des Sciences de l'Evolution de MontpellierAdresse e-mail validée de unil.ch
KIWOONG NAMINRAEAdresse e-mail validée de inrae.fr
John HawksPaleoanthropologist, University of Wisconsin-MadisonAdresse e-mail validée de wisc.edu
Gerton LunterFull Professor, Groningen UniversityAdresse e-mail validée de umcg.nl

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Julien Yann Dutheil

Max Planck Institute for Evolutionary Biology

Adresse e-mail validée de evolbio.mpg.de - Page d'accueil

Molecular Evolution Population Genomics Evolutionary Bioinformatics


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
Insights into hominid evolution from the gorilla genome sequence A Scally, JY Dutheil, LDW Hillier, GE Jordan, I Goodhead, J Herrero, ... Nature 483 (7388), 169-175, 2012	828	2012
Comparative and demographic analysis of orang-utan genomes DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ... Nature 469 (7331), 529-533, 2011	713	2011
The bonobo genome compared with the chimpanzee and human genomes K Prüfer, K Munch, I Hellmann, K Akagi, JR Miller, B Walenz, S Koren, ... Nature 486 (7404), 527-531, 2012	681	2012
Recombination difference between sexes: a role for haploid selection T Lenormand, J Dutheil PLoS biology 3 (3), e63, 2005	276	2005
Incomplete lineage sorting patterns among human, chimpanzee, and orangutan suggest recent orangutan speciation and widespread selection A Hobolth, JY Dutheil, J Hawks, MH Schierup, T Mailund Genome research 21 (3), 349-356, 2011	253	2011
The making of a new pathogen: insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species EH Stukenbrock, T Bataillon, JY Dutheil, TT Hansen, R Li, M Zala, ... Genome research 21 (12), 2157-2166, 2011	222	2011
Fusion of two divergent fungal individuals led to the recent emergence of a unique widespread pathogen species EH Stukenbrock, FB Christiansen, TT Hansen, JY Dutheil, MH Schierup Proceedings of the National Academy of Sciences 109 (27), 10954-10959, 2012	182	2012
Package ‘ape’ E Paradis, S Blomberg, B Bolker, J Brown, J Claude, HS Cuong, ... Analyses of phylogenetics and evolution, version, 2.4-1, 2018	180	2018
Bio++: efficient extensible libraries and tools for computational molecular evolution L Guéguen, S Gaillard, B Boussau, M Gouy, M Groussin, NC Rochette, ... Molecular biology and evolution 30 (8), 1745-1750, 2013	174	2013
Non-homogeneous models of sequence evolution in the Bio++ suite of libraries and programs J Dutheil, B Boussau BMC evolutionary biology 8, 1-12, 2008	163	2008
Bio++: a set of C++ libraries for sequence analysis, phylogenetics, molecular evolution and population genetics J Dutheil, S Gaillard, E Bazin, S Glémin, V Ranwez, N Galtier, K Belkhir BMC bioinformatics 7 (1), 1-6, 2006	139	2006
A model-based approach for detecting coevolving positions in a molecule J Dutheil, T Pupko, A Jean-Marie, N Galtier Molecular biology and evolution 22 (9), 1919-1928, 2005	134	2005
APE: analyses of phylogenetics and evolution E Paradis, K Strimmer, J Claude, G Jobb, R Opgen-Rhein, J Dutheil, ... R package version 1 (4), 2006	132	2006
Ancestral population genomics: the coalescent hidden Markov model approach JY Dutheil, G Ganapathy, A Hobolth, T Mailund, MK Uyenoyama, ... Genetics 183 (1), 259-274, 2009	127	2009
A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species T Mailund, AE Halager, M Westergaard, JY Dutheil, K Munch, ... PLoS genetics 8 (12), e1003125, 2012	124	2012
A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species T Mailund, AE Halager, M Westergaard, JY Dutheil, K Munch, ... PLoS genetics 8 (12), e1003125, 2012	124	2012
A tale of genome compartmentalization: the evolution of virulence clusters in smut fungi JY Dutheil, G Mannhaupt, G Schweizer, C MK Sieber, M Münsterkötter, ... Genome biology and evolution 8 (3), 681-704, 2016	123	2016
Estimating divergence time and ancestral effective population size of Bornean and Sumatran orangutan subspecies using a coalescent hidden Markov model T Mailund, JY Dutheil, A Hobolth, G Lunter, MH Schierup PLoS genetics 7 (3), e1001319, 2011	109	2011
The WOPR Protein Ros1 Is a Master Regulator of Sporogenesis and Late Effector Gene Expression in the Maize Pathogen Ustilago maydis M Tollot, D Assmann, C Becker, J Altmüller, JY Dutheil, CE Wegner, ... PLoS pathogens 12 (6), e1005697, 2016	89	2016
Extreme selective sweeps independently targeted the X chromosomes of the great apes K Nam, K Munch, A Hobolth, JY Dutheil, KR Veeramah, AE Woerner, ... Proceedings of the National Academy of Sciences 112 (20), 6413-6418, 2015	79	2015

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