Gordon K Smyth

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Coauteurs

Wei ShiProfessor and Laboratory Head, Olivia Newton-John Cancer Research InstituteAdresse e-mail validée de onjcri.org.au
Matthew E RitchieThe Walter and Eliza Hall Institute of Medical ResearchAdresse e-mail validée de wehi.edu.au
Belinda PhipsonPostdoctoral Researcher, Peter MacCallum Cancer CentreAdresse e-mail validée de petermac.org
Yunshun ChenUniversity of Melbourne, Walter and Eliza Hall Institute of Medical ResearchAdresse e-mail validée de wehi.edu.au
Davis J McCarthyHead, Bioinformatics and Cellular Genomics, St Vincent's Institute of Medical ResearchAdresse e-mail validée de svi.edu.au
Di WuDental School, Jointly with Biostatistics Department at University of North Carolina, Chapel HillAdresse e-mail validée de unc.edu
Alicia OshlackPeter MacCallum Cancer CentreAdresse e-mail validée de petermac.org
Mark D. RobinsonAssociate Professor of Statistical Genomics, University of ZurichAdresse e-mail validée de imls.uzh.ch
Yang LiaoBioinformatics and Cancer Genomics Laboratory, ONJCRIAdresse e-mail validée de onjcri.org.au
Charity W LawThe Walter and Eliza Hall Institute of Medical ResearchAdresse e-mail validée de wehi.edu.au
Terence P SpeedThe Walter & Eliza Hall InstituteAdresse e-mail validée de wehi.edu.au
Peter K. DunnUniversity of the Sunshine CoastAdresse e-mail validée de usc.edu.au
Aaron LunGenentech, Inc.Adresse e-mail validée de gene.com
Alexandra L GarnhamThe Walter and Eliza Hall Institute of Medical ResearchAdresse e-mail validée de wehi.edu.au
Göknur GinerPostdoctoral researcherAdresse e-mail validée de wehi.edu.au
Carolyn de GraafWalter and Eliza Hall InstituteAdresse e-mail validée de wehi.edu.au
Joshy GeorgeAssociate Director, Computational Sciences, Jackson Laboratory for Genomic Medicine, ConnecticutAdresse e-mail validée de jax.org
Hannah D CoughlanThe Walter & Eliza hall institute of medical researchAdresse e-mail validée de wehi.edu.au
Melissa J DavisThe Walter and Eliza Hall Institute of Medical ResearchAdresse e-mail validée de wehi.edu.au
Yifang Hu

Gordon K Smyth

Division Head, Bioinformatics, Walter and Eliza Hall Institute of Medical Research

Adresse e-mail validée de wehi.edu.au - Page d'accueil

Bioinformatics statistics biostatistics genomics statistical computing


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data MD Robinson, DJ McCarthy, GK Smyth Bioinformatics 26 (1), 139-140, 2010	17880	2010
Bioconductor: open software development for computational biology and bioinformatics RC Gentleman, VJ Carey, DM Bates, B Bolstad, M Dettling, S Dudoit, ... Genome biology 5 (10), R80, 2004	12109	2004
Linear models and empirical Bayes methods for assessing differential expression in microarray experiments GK Smyth Statistical applications in genetics and molecular biology 3 (1), Article 3, 2004	11797	2004
limma powers differential expression analyses for RNA-sequencing and microarray studies ME Ritchie, B Phipson, D Wu, Y Hu, CW Law, W Shi, GK Smyth Nucleic acids research 43 (7), e47, 2015	10016	2015
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features Y Liao, GK Smyth, W Shi Bioinformatics 30 (7), 923-930, 2014	5855	2014
Limma: linear models for microarray data GK Smyth Bioinformatics and computational biology solutions using R and Bioconductor …, 2005	5792	2005
Limma: linear models for microarray data user’s guide GK Smyth, N Thorne, J Wettenhall Bioconductor, limma package, 2005	5767*	2005
Limma: linear models for microarray data GK Smyth Bioinformatics and computational biology solutions using R and Bioconductor …, 2005	5714	2005
Limma: linear models for microarray data GK Smyth Bioinformatics and computational biology solutions using R and Bioconductor …, 2005	5701	2005
Limma: linear models for microarray data GK Smyth Bioinformatics and computational biology solutions using R and Bioconductor …, 2005	5701	2005
Limma: linear models for microarray data GK Smyth Bioinformatics and computational biology solutions using R and Bioconductor …, 2005	5701	2005
Gene ontology analysis for RNA-seq: accounting for selection bias MD Young, MJ Wakefield, GK Smyth, A Oshlack Genome Biology 11, R14, 2010	3131	2010
Voom: precision weights unlock linear model analysis tools for RNA-seq read counts CW Law, Y Chen, W Shi, GK Smyth Genome Biology 15 (2), R29, 2014	2690	2014
Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation DJ McCarthy, Y Chen, GK Smyth Nucleic acids research 40 (10), 4288-4297, 2012	2443	2012
Generation of a functional mammary gland from a single stem cell M Shackleton, F Vaillant, KJ Simpson, J Stingl, GK Smyth, ... Nature 439 (7072), 84-88, 2006	2159	2006
Normalization of cDNA microarray data GK Smyth, T Speed Methods 31 (4), 265-273, 2003	2137	2003
Orchestrating high-throughput genomic analysis with Bioconductor W Huber, VJ Carey, R Gentleman, S Anders, M Carlson, BS Carvalho, ... Nature methods 12 (2), 115-121, 2015	1858	2015
The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote Y Liao, GK Smyth, W Shi Nucleic acids research 41 (10), e108, 2013	1455	2013
Use of within-array replicate spots for assessing differential expression in microarray experiments GK Smyth, J Michaud, HS Scott Bioinformatics 21 (9), 2067-2075, 2005	1364	2005
Aberrant luminal progenitors as the candidate target population for basal tumor development in BRCA1 mutation carriers E Lim, F Vaillant, D Wu, NC Forrest, B Pal, AH Hart, ML Asselin-Labat, ... Nature medicine 15 (8), 907-913, 2009	1275	2009

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