David Allouche
David Allouche
MIAT , inra toulouse
Verified email at toulouse.inra.fr
Title
Cited by
Cited by
Year
Gene regulatory network reconstruction using Bayesian networks, the Dantzig Selector, the Lasso and their meta-analysis
M Vignes, J Vandel, D Allouche, N Ramadan-Alban, C Cierco-Ayrolles, ...
PloS one 6 (12), e29165, 2011
1142011
Simple Two-Body Cation−Water Interaction Potentials Derived from ab Initio Calculations. Comparison to Results Obtained with an Empirical Approach
X Periole, D Allouche, JP Daudey, YH Sanejouand
The Journal of Physical Chemistry B 101 (25), 5018-5025, 1997
681997
Computational protein design as an optimization problem
D Allouche, I André, S Barbe, J Davies, S de Givry, G Katsirelos, ...
Artificial Intelligence 212, 59-79, 2014
632014
A new framework for computational protein design through cost function network optimization
S Traoré, D Allouche, I André, S De Givry, G Katsirelos, T Schiex, S Barbe
Bioinformatics 29 (17), 2129-2136, 2013
632013
Ca2+/Mg2+ exchange in parvalbumin and other EF-hand proteins. A theoretical study
D Allouche, J Parello, YH Sanejouand
Journal of molecular biology 285 (2), 857-873, 1999
591999
Guaranteed discrete energy optimization on large protein design problems
D Simoncini, D Allouche, S de Givry, C Delmas, S Barbe, T Schiex
Journal of chemical theory and computation 11 (12), 5980-5989, 2015
542015
Multi-language evaluation of exact solvers in graphical model discrete optimization
B Hurley, B O’Sullivan, D Allouche, G Katsirelos, T Schiex, M Zytnicki, ...
Constraints 21 (3), 413-434, 2016
502016
Anytime hybrid best-first search with tree decomposition for weighted CSP
D Allouche, S De Givry, G Katsirelos, T Schiex, M Zytnicki
International Conference on Principles and Practice of Constraint …, 2015
392015
Russian doll search with tree decomposition
M Sanchez, D Allouche, S De Givry, T Schiex
21st International Joint Conference on Artificial Intelligence, 6, 2009
352009
New effective potentials extraction method for the interaction between cations and water
X Periole, D Allouche, A Ramirez-Solis, I Ortega-Blake, JP Daudey, ...
The Journal of Physical Chemistry B 102 (43), 8579-8587, 1998
341998
Fast search algorithms for computational protein design
S Traoré, KE Roberts, D Allouche, BR Donald, I André, T Schiex, S Barbe
Journal of computational chemistry 37 (12), 1048-1058, 2016
302016
Toulbar2, an open source exact cost function network solver
D Allouche, S de Givry, T Schiex
Technical report, INRIA, 2010
302010
Synthesis of a new cationic pyropheophorbide derivative and studies of its aggregation process in aqueous solution
AS Fabiano, D Allouche, YH Sanejouand, N Paillous
Photochemistry and photobiology 66 (3), 336-345, 1997
291997
Computational protein design as a cost function network optimization problem
D Allouche, S Traoré, I André, S De Givry, G Katsirelos, S Barbe, T Schiex
International Conference on Principles and Practice of Constraint …, 2012
212012
Towards parallel non serial dynamic programming for solving hard weighted csp
D Allouche, S De Givry, T Schiex
International Conference on Principles and Practice of Constraint …, 2010
212010
Filtering decomposable global cost functions
D Allouche, C Bessière, P Boizumault, S De Givry, P Gutierrez, S Loudni, ...
Proceedings of the AAAI Conference on Artificial Intelligence 26 (1), 2012
152012
BioMAJ: a flexible framework for databanks synchronization and processing
O Filangi, Y Beausse, A Assi, L Legrand, JM Larré, V Martin, O Collin, ...
Bioinformatics 24 (16), 1823-1825, 2008
122008
A panel of learning methods for the reconstruction of gene regulatory networks in a systems genetics context
D Allouche, C Cierco-Ayrolles, S De Givry, G Guillermin, B Mangin, ...
Gene Network Inference, 9-31, 2013
112013
Tractability-preserving transformations of global cost functions
D Allouche, C Bessiere, P Boizumault, S De Givry, P Gutierrez, JHM Lee, ...
Artificial Intelligence 238, 166-189, 2016
102016
Approximate counting with deterministic guarantees for affinity computation
C Viricel, D Simoncini, D Allouche, S De Givry, S Barbe, T Schiex
Modelling, Computation and Optimization in Information Systems and …, 2015
102015
The system can't perform the operation now. Try again later.
Articles 1–20