| False-positive tuberculin skin tests: what is the absolute effect of BCG and non-tuberculous mycobacteria? M Farhat, C Greenaway, M Pai, D Menzies The International Journal of Tuberculosis and Lung Disease 10 (11), 1192-1204, 2006 | 794 | 2006 |
| A comparison of early versus late initiation of renal replacement therapy in critically ill patients with acute kidney injury: a systematic review and meta-analysis CJ Karvellas, MR Farhat, I Sajjad, SS Mogensen, AA Leung, R Wald, ... Critical care 15 (1), 1-10, 2011 | 478 | 2011 |
| Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis MR Farhat, BJ Shapiro, KJ Kieser, R Sultana, KR Jacobson, TC Victor, ... Nature genetics 45 (10), 1183-1189, 2013 | 388 | 2013 |
| Interpreting expression data with metabolic flux models: predicting Mycobacterium tuberculosis mycolic acid production C Colijn, A Brandes, J Zucker, DS Lun, B Weiner, MR Farhat, TY Cheng, ... PLoS Comput Biol 5 (8), e1000489, 2009 | 383 | 2009 |
| Respiratory care: principles and practice D Hess, N MacIntyre, W Galvin, S Mishoe Jones & Bartlett Learning, 2011 | 130 | 2011 |
| Thinking in three dimensions: a web-based algorithm to aid the interpretation of tuberculin skin test results D Menzies, G Gardiner, M Farhat, C Greenaway, M Pai The International Journal of Tuberculosis and Lung Disease 12 (5), 498-505, 2008 | 130 | 2008 |
| Prediction of susceptibility to first-line tuberculosis drugs by DNA sequencing C Allix-Beguec, I Arandjelovic, L Bi, P Beckert, M Bonnet, P Bradley, ... New England Journal of Medicine 379 (15), 1403-1415, 2018 | 108 | 2018 |
| Genetic Determinants of Drug Resistance in Mycobacterium tuberculosis and Their Diagnostic Value MR Farhat, R Sultana, O Iartchouk, S Bozeman, J Galagan, P Sisk, ... American journal of respiratory and critical care medicine 194 (5), 621-630, 2016 | 101 | 2016 |
| Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues CJ Meehan, GA Goig, TA Kohl, L Verboven, A Dippenaar, M Ezewudo, ... Nature Reviews Microbiology 17 (9), 533-545, 2019 | 96 | 2019 |
| Systematic review of allelic exchange experiments aimed at identifying mutations that confer drug resistance in Mycobacterium tuberculosis H Nebenzahl-Guimaraes, KR Jacobson, MR Farhat, MB Murray Journal of antimicrobial chemotherapy 69 (2), 331-342, 2014 | 79 | 2014 |
| Technical report on critical concentrations for drug susceptibility testing of medicines used in the treatment of drug-resistant tuberculosis World Health Organization World Health Organization, 2018 | 76 | 2018 |
| Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events JE Lemieux, KJ Siddle, BM Shaw, C Loreth, SF Schaffner, ... Science 371 (6529), 2021 | 63* | 2021 |
| Gyrase mutations are associated with variable levels of fluoroquinolone resistance in Mycobacterium tuberculosis MR Farhat, KR Jacobson, MF Franke, D Kaur, A Sloutsky, CD Mitnick, ... Journal of clinical microbiology 54 (3), 727-733, 2016 | 63 | 2016 |
| Prediction of susceptibility to first-line tuberculosis drugs by DNA sequencing CRyPTIC Consortium and the 100,000 Genomes Project New England Journal of Medicine 379 (15), 1403-1415, 2018 | 46 | 2018 |
| GWAS for quantitative resistance phenotypes in Mycobacterium tuberculosis reveals resistance genes and regulatory regions MR Farhat, L Freschi, R Calderon, T Ioerger, M Snyder, CJ Meehan, ... Nature communications 10 (1), 1-11, 2019 | 44* | 2019 |
| Beyond multidrug resistance: Leveraging rare variants with machine and statistical learning models in Mycobacterium tuberculosis resistance prediction ML Chen, A Doddi, J Royer, L Freschi, M Schito, M Ezewudo, IS Kohane, ... EBioMedicine 43, 356-369, 2019 | 41* | 2019 |
| Case 7-2007: A 59-year-old woman with diabetic renal disease and nonhealing skin ulcers H Bazari, MR Jaff, M Mannstadt, S Yan New England Journal of Medicine 356 (10), 1049-1057, 2007 | 39 | 2007 |
| A phylogeny-based sampling strategy and power calculator informs genome-wide associations study design for microbial pathogens MR Farhat, BJ Shapiro, SK Sheppard, C Colijn, M Murray Genome medicine 6 (11), 1-14, 2014 | 31 | 2014 |
| Gastrointestinal complications in critically ill patients with and without COVID-19 M El Moheb, L Naar, MA Christensen, C Kapoen, LR Maurer, M Farhat, ... Jama 324 (18), 1899-1901, 2020 | 28 | 2020 |
| Transmissible Mycobacterium tuberculosis Strains Share Genetic Markers and Immune Phenotypes H Nebenzahl-Guimaraes, A van Laarhoven, MR Farhat, VACM Koeken, ... American journal of respiratory and critical care medicine 195 (11), 1519-1527, 2017 | 28 | 2017 |
Luca FreschiResearch fellow, Department of Biomedical informatics, Harvard UniversityVerified email at hms.harvard.edu
