Machine learning reveals the critical interactions for SARS-CoV-2 spike protein binding to ACE2 A Pavlova, Z Zhang, A Acharya, DL Lynch, YT Pang, Z Mou, JM Parks, ... The journal of physical chemistry letters 12 (23), 5494-5502, 2021 | 59 | 2021 |
Plasticity within the barrel domain of BamA mediates a hybrid-barrel mechanism by BAM R Wu, JW Bakelar, K Lundquist, Z Zhang, KM Kuo, D Ryoo, YT Pang, ... Nature Communications 12 (1), 7131, 2021 | 48 | 2021 |
Bifunctional janus particles as multivalent synthetic nanoparticle antibodies (SNAbs) for selective depletion of target cells J Liu, R Toy, C Vantucci, P Pradhan, Z Zhang, KM Kuo, KP Kubelick, ... Nano letters 21 (1), 875-886, 2021 | 33 | 2021 |
Structural insight into toxin secretion by contact-dependent growth inhibition transporters J Guerin, I Botos, Z Zhang, K Lundquist, JC Gumbart, SK Buchanan Elife 9, e58100, 2020 | 20 | 2020 |
Inward-facing glycine residues create sharp turns in β-barrel membrane proteins Z Zhang, D Ryoo, C Balusek, A Acharya, MO Rydmark, D Linke, ... Biochimica et Biophysica Acta (BBA)-Biomembranes 1863 (10), 183662, 2021 | 6 | 2021 |
Enhanced surface accessibility of SARS-CoV-2 Omicron spike protein due to an altered glycosylation profile D Wang, Z Zhang, J Baudys, C Haynes, SH Osman, B Zhou, JR Barr, ... ACS Infectious Diseases, 2024 | 2 | 2024 |
Extraction of Dielectric Permittivity from Atomistic Molecular Dynamics Simulations and Microwave Measurements A Saad-Falcon, Z Zhang, D Ryoo, J Dee, RS Westafer, JC Gumbart The Journal of Physical Chemistry B 126 (40), 8021-8029, 2022 | 1 | 2022 |
Comparing the dynamics of the BAM complex between two species Z Fan, Z Zhang, E Billings, N Noinaj, JC Gumbart Biophysical Journal 121 (3), 461a, 2022 | | 2022 |
BamB Stabilizes BamA's Laterally Open and Closed States D Ryoo, KM Kuo, Z Zhang, YT Pang, JC Gumbart Biophysical Journal 120 (3), 91a, 2021 | | 2021 |
Lateral Gate Opening of BAM Complex Studied by Free Energy Calculations and the String Method YT Pang, D Ryoo, Z Zhang, K Lundquist, JC Gumbart Biophysical Journal 118 (3), 363a, 2020 | | 2020 |