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Shaoli Das
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Circ2Traits: a comprehensive database for circular RNA potentially associated with disease and traits
S Ghosal, S Das, R Sen, P Basak, J Chakrabarti
Frontiers in genetics 4, 68415, 2013
4662013
Competing Endogenous RNA: The Key to Posttranscriptional Regulation
R Sen, S Ghosal, S Das, S Balti, J Chakrabarti
The Scientific World Journal 2014 (2014), 2014
3002014
ln Ce DB: database of human long noncoding RNA acting as competing endogenous RNA
S Das, S Ghosal, R Sen, J Chakrabarti
PloS one 9 (6), e98965, 2014
1672014
Long noncoding RNAs: new players in the molecular mechanism for maintenance and differentiation of pluripotent stem cells
S Ghosal, S Das, J Chakrabarti
Stem cells and development 22 (16), 2240-2253, 2013
1262013
Dynamic changes in global microRNAome and transcriptome reveal complex miRNA-mRNA regulated host response to Japanese Encephalitis Virus in microglial cells.
B Kumari, P Jain, S Das, S Ghosal, B Hazra, AC Trivedi, A Basu, ...
Scientific Reports 6 (20263), 2016
582016
Radiation-induced long noncoding RNAs in a mouse model after whole-body irradiation
MJ Aryankalayil, S Chopra, J Levin, I Eke, A Makinde, S Das, ...
Radiation research 189 (3), 251-263, 2018
492018
HumanViCe: host ceRNA network in virus infected cells in human
S Ghosal, S Das, R Sen, J Chakrabarti
Frontiers in genetics 5, 97044, 2014
492014
Cancer-Specific Immune Prognostic Signature in Solid Tumors and Its Relation to Immune Checkpoint Therapies
S Das, U Camphausen, Kevin, Shankavaram
Cancers 12 (9), 2476, 2020
482020
DiscoverSL: An R package for Multi-omic data driven prediction of synthetic lethality in cancers
S Das, X Deng, K Camphausen, U Shankavaram
Bioinformatics, 2018
392018
Correlation of altered expression of a long non-coding RNA, NEAT1, in peripheral blood mononuclear cells with dengue disease progression
AD Pandey, S Goswami, S Shukla, S Das, S Ghosal, M Pal, ...
Journal of Infection 75 (6), 541-554, 2017
332017
HNOCDB: a comprehensive database of genes and miRNAs relevant to head and neck and oral cancer
S Mitra, S Das, S Das, S Ghosal, J Chakrabarti
Oral oncology 48 (2), 117-119, 2012
232012
SL-BioDP: multi-cancer interactive tool for prediction of synthetic lethality and response to cancer treatment
X Deng, S Das, K Valdez, K Camphausen, U Shankavaram
Cancers 11 (11), 1682, 2019
212019
Pan-cancer analysis of potential synthetic lethal drug targets specific to alterations in DNA damage response
S Das, K Camphausen, U Shankavaram
Frontiers in Oncology 9, 1136, 2019
172019
Long intergenic noncoding RNA profiles of pheochromocytoma and paraganglioma: a novel prognostic biomarker
S Ghosal, S Das, Y Pang, MK Gonzales, TT Huynh, Y Yang, D Taieb, ...
International journal of cancer 146 (8), 2326-2335, 2020
162020
SeedSeq: off-target transcriptome database
S Das, S Ghosal, J Chakrabarti, K Kozak
BioMed research international 2013, 2013
132013
Natural variation in macrophage polarization and function impact pneumocyte senescence and susceptibility to fibrosis
EJ Chung, S Kwon, U Shankavaram, AO White, S Das, DE Citrin
Aging (Albany NY) 14 (19), 7692, 2022
92022
miRepress: modelling gene expression regulation by microRNA with non-conventional binding sites
S Ghosal, S Saha, S Das, R Sen, S Goswami, SS Jana, J Chakrabarti
Scientific reports 6 (1), 22334, 2016
92016
In silico drug repurposing to combat COVID-19 based on pharmacogenomics of patient transcriptomic data
S Das, K Camphausen, U Shankavaram
Research square, 2020
82020
An siRNA designing tool with a unique functional off-target filtering approach
S Das, S Ghosal, K Kozak, J Chakrabarti
Journal of Biomolecular Structure and Dynamics 31 (11), 1343-1357, 2013
82013
Bowel and bladder reproducibility in image guided radiation therapy for prostate cancer: results of a patterns of practice survey
LS Rowe, JJ Mandia, KE Salerno, UT Shankavaram, S Das, FE Escorcia, ...
Advances in radiation oncology 7 (5), 100902, 2022
72022
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Articles 1–20