Emilie Muller
Emilie Muller
UMR7156 CNRS-Université de Strasbourg/Luxembourg Center for Systems Biomedicine, University of
Adresse e-mail validée de unistra.fr
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Methylobacterium Genome Sequences: A Reference Blueprint to Investigate Microbial Metabolism of C1 Compounds from Natural and Industrial Sources
S Vuilleumier, L Chistoserdova, MC Lee, F Bringel, A Lajus, Y Zhou, ...
PloS one 4 (5), e5584, 2009
2402009
Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia
LW Hugerth, EEL Muller, YOO Hu, LAM Lebrun, H Roume, D Lundin, ...
PloS one 9 (4), e95567, 2014
1512014
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life
L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ...
Frontiers in microbiology 8, 738, 2017
1462017
Complete genome sequences of six strains of the genus Methylobacterium
CJ Marx, F Bringel, L Chistoserdova, L Moulin, M Farhan Ul Haque, ...
Journal of Bacteriology 194 (17), 4746-4748, 2012
912012
A hundred years of activated sludge: time for a rethink
AR Sheik, EEL Muller, P Wilmes
Frontiers in microbiology 5, 47, 2014
882014
A biomolecular isolation framework for eco-systems biology
H Roume, EEL Muller, T Cordes, J Renaut, K Hiller, P Wilmes
The ISME journal 7 (1), 110-121, 2013
862013
Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation
O Svartström, J Alneberg, N Terrapon, V Lombard, I de Bruijn, J Malmsten, ...
The ISME journal 11 (11), 2538-2551, 2017
812017
IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses
S Narayanasamy, Y Jarosz, EEL Muller, A Heintz-Buschart, M Herold, ...
Genome biology 17 (1), 1-21, 2016
752016
A year of monitoring 20 mesophilic full-scale bioreactors reveals the existence of stable but different core microbiomes in bio-waste and wastewater anaerobic digestion systems
M Calusinska, X Goux, M Fossépré, EEL Muller, P Wilmes, P Delfosse
Biotechnology for biofuels 11 (1), 1-19, 2018
712018
Lipid-based biofuel production from wastewater
EEL Muller, AR Sheik, P Wilmes
Current opinion in biotechnology 30, 9-16, 2014
692014
Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage
EEL Muller, N Pinel, CC Laczny, MR Hoopmann, S Narayanasamy, ...
Nature communications 5 (1), 1-10, 2014
662014
Condensing the omics fog of microbial communities
EEL Muller, E Glaab, P May, N Vlassis, P Wilmes
Trends in microbiology 21 (7), 325-333, 2013
622013
Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks
H Roume, A Heintz-Buschart, EEL Muller, P May, VP Satagopam, ...
npj Biofilms and Microbiomes 1 (1), 1-11, 2015
602015
Dichloromethane-degrading bacteria in the genomic age
EEL Muller, F Bringel, S Vuilleumier
Research in Microbiology 162 (9), 869-876, 2011
582011
Sequential isolation of metabolites, RNA, DNA, and proteins from the same unique sample
H Roume, A Heintz-Buschart, EEL Muller, P Wilmes
Methods in enzymology 531, 219-236, 2013
462013
Functional genomics of dichloromethane utilization in Methylobacterium extorquens DM4
EEL Muller, E Hourcade, Y Louhichi‐Jelail, P Hammann, S Vuilleumier, ...
Environmental Microbiology 13 (9), 2518-2535, 2011
452011
Using metabolic networks to resolve ecological properties of microbiomes
EEL Muller, K Faust, S Widder, M Herold, SM Arbas, P Wilmes
Current Opinion in Systems Biology 8, 73-80, 2018
422018
Integrated omics for the identification of key functionalities in biological wastewater treatment microbial communities
S Narayanasamy, ME E.L., S Abdul R., W Paul
microbial biotechnology, 2015
392015
In situ phenotypic heterogeneity among single cells of the filamentous bacterium Candidatus Microthrix parvicella
AR Sheik, EEL Muller, JN Audinot, LA Lebrun, P Grysan, C Guignard, ...
The ISME journal 10 (5), 1274-1279, 2016
332016
Complete genome sequence of the chloromethane-degrading Hyphomicrobium sp. strain MC1
S Vuilleumier, T Nadalig, M Farhan Ul Haque, G Magdelenat, A Lajus, ...
Journal of bacteriology 193 (18), 5035-5036, 2011
332011
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