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DECKO: Single-oligo, dual-CRISPR deletion of genomic elements including long non-coding RNAs
E Aparicio-Prat, C Arnan, I Sala, N Bosch, R Guigó, R Johnson
BMC genomics 16, 1-15, 2015
1252015
Scalable design of paired CRISPR guide RNAs for genomic deletion
C Pulido-Quetglas, E Aparicio-Prat, C Arnan, T Polidori, T Hermoso, ...
PLoS computational biology 13 (3), e1005341, 2017
872017
SRSF1 and PTBP1 Are trans-Acting Factors That Suppress the Formation of a CD33 Splicing Isoform Linked to Alzheimer’s Disease Risk
P van Bergeijk, U Seneviratne, E Aparicio-Prat, R Stanton, SA Hasson
Molecular and Cellular Biology 39 (18), e00568-18, 2019
262019
3’Pool-seq: an optimized cost-efficient and scalable method of whole-transcriptome gene expression profiling
G Sholder, TA Lanz, R Moccia, J Quan, E Aparicio-Prat, R Stanton, HS Xi
BMC genomics 21, 1-11, 2020
182020
Human selenoprotein P and S variant mRNAs with different numbers of SECIS elements and inferences from mutant mice of the roles of multiple SECIS elements
S Wu, M Mariotti, D Santesmasses, KE Hill, J Baclaocos, E Aparicio-Prat, ...
Open Biology 6 (11), 160241, 2016
142016
Splicing of a non-coding antisense transcript controls LEF1 gene expression
M Beltran, E Aparicio-Prat, R Mazzolini, A Millanes-Romero, P Massó, ...
Nucleic Acids Research 43 (12), 5785-5797, 2015
132015
Paired guide RNA CRISPR-Cas9 screening for protein-coding genes and lncRNAs involved in transdifferentiation of human B-cells to macrophages
C Arnan, S Ullrich, C Pulido-Quetglas, R Nurtdinov, A Esteban, ...
BMC genomics 23 (1), 402, 2022
82022
African signatures of recent positive selection in human FOXI1
A Moreno-Estrada, E Aparicio-Prat, M Sikora, J Engelken, ...
BMC evolutionary biology 10, 1-12, 2010
52010
Roadmap for the use of base editors to decipher drug mechanism of action
E Aparicio-Prat, D Yan, M Mariotti, M Bassik, G Hess, JP Fortin, A Weston, ...
Plos one 16 (9), e0257537, 2021
22021
Scalable design of paired CRISPR guide RNAs for genomic deletion
C Pulido-Quetglas, E Aparicio-Prat, C Arnan, T Polidori, T Hermoso, ...
bioRxiv, 052795, 2016
12016
Erratum to:‘DECKO: Single-oligo, dual-CRISPR deletion of genomic elements including long non-coding RNAs’
E Aparicio-Prat, C Arnan, I Sala, N Bosch, R Guigó, R Johnson
BMC genomics 17 (215), 10.1186, 2016
12016
Paired guide RNA CRISPR-Cas9 screening for protein-coding genes and lncRNAs involved in transdifferentiation of human B-cells to macrophages
S Ullrich, C Arnan, C Pulido-Quetglas, R Nurtdinov, A Esteban, ...
bioRxiv, 2021.04. 26.441397, 2021
2021
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