Guillaume Bouvier
Guillaume Bouvier
Institut Pasteur
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Automatic clustering of docking poses in virtual screening process using self-organizing map
G Bouvier, N Evrard-Todeschi, JP Girault, G Bertho
Bioinformatics 26 (1), 53-60, 2009
Improved large-scale prediction of growth inhibition patterns using the NCI60 cancer cell line panel
I Cortés-Ciriano, GJP van Westen, G Bouvier, M Nilges, JP Overington, ...
Bioinformatics 32 (1), 85-95, 2015
An algorithm to enumerate all possible protein conformations verifying a set of distance constraints
A Cassioli, B Bardiaux, G Bouvier, A Mucherino, R Alves, L Liberti, ...
BMC bioinformatics 16 (1), 23, 2015
Distinct docking and stabilization steps of the pseudopilus conformational transition path suggest rotational assembly of type IV pilus-like fibers
M Nivaskumar, G Bouvier, M Campos, N Nadeau, X Yu, EH Egelman, ...
Structure 22 (5), 685-696, 2014
Automated structure modeling of large protein assemblies using crosslinks as distance restraints
M Ferber, J Kosinski, A Ori, UJ Rashid, M Moreno-Morcillo, B Simon, ...
Nature methods 13 (6), 515, 2016
Neisseria meningitidis type IV pili composed of sequence invariable pilins are masked by multisite glycosylation
J Gault, M Ferber, S Machata, AF Imhaus, C Malosse, A Charles-Orszag, ...
PLoS pathogens 11 (9), e1005162, 2015
Contact-based ligand-clustering approach for the identification of active compounds in virtual screening
AB Mantsyzov, G Bouvier, N Evrard-Todeschi, G Bertho
Advances and applications in bioinformatics and chemistry: AABC 5, 61, 2012
A convective replica‐exchange method for sampling new energy basins
YG Spill, G Bouvier, M Nilges
Journal of computational chemistry 34 (2), 132-140, 2013
Biogenesis and structure of a type VI secretion baseplate
Y Cherrak, C Rapisarda, R Pellarin, G Bouvier, B Bardiaux, F Allain, ...
Nature microbiology 3 (12), 1404, 2018
An automatic tool to analyze and cluster macromolecular conformations based on self-organizing maps
G Bouvier, N Desdouits, M Ferber, A Blondel, M Nilges
Bioinformatics 31 (9), 1490-1492, 2014
Temperature accelerated molecular dynamics with soft-ratcheting criterion orients enhanced sampling by low-resolution information
I Cortes-Ciriano, G Bouvier, M Nilges, L Maragliano, TE Malliavin
Journal of chemical theory and computation 11 (7), 3446-3454, 2015
Functional motions modulating VanA ligand binding unraveled by self-organizing maps
G Bouvier, N Duclert-Savatier, N Desdouits, D Meziane-Cherif, A Blondel, ...
Journal of chemical information and modeling 54 (1), 289-301, 2014
Stabilization of the integrase‐DNA complex by Mg2+ ions and prediction of key residues for binding HIV‐1 integrase inhibitors
L Miri, G Bouvier, A Kettani, A Mikou, L Wakrim, M Nilges, TE Malliavin
Proteins: Structure, Function, and Bioinformatics 82 (3), 466-478, 2014
Identification of binding sites and favorable ligand binding moieties by virtual screening and self-organizing map analysis
E Harigua-Souiai, I Cortes-Ciriano, N Desdouits, TE Malliavin, I Guizani, ...
BMC bioinformatics 16 (1), 93, 2015
The key-role of tyrosine 155 in the mechanism of prion transconformation as highlighted by a study of sheep mutant peptides
G Bertho, G Bouvier, GHB Hoa, JP Girault
Peptides 29 (7), 1073-1084, 2008
Identification of novel leishmanicidal molecules by virtual and biochemical screenings targeting Leishmania eukaryotic translation initiation factor 4A
E Harigua-Souiai, YZ Abdelkrim, I Bassoumi-Jamoussi, O Zakraoui, ...
PLoS neglected tropical diseases 12 (1), e0006160, 2018
Target Engagement and Binding Mode of an Antituberculosis Drug to Its Bacterial Target Deciphered in Whole Living Cells by NMR
G Bouvier, C Simenel, J Jang, NP Kalia, I Choi, M Nilges, K Pethe, ...
Biochemistry 58 (6), 526-533, 2018
Automatic building of protein atomic models from cryo-EM maps
G Bouvier, B Bardiaux, M Nilges
Biophysical Journal 114 (3), 190a-191a, 2018
Structural characterization of whirlin reveals an unexpected and dynamic supramodule conformation of its PDZ tandem
F Delhommel, F Cordier, B Bardiaux, G Bouvier, B Colcombet-Cazenave, ...
Structure 25 (11), 1645-1656. e5, 2017
Building Graphs To Describe Dynamics, Kinetics, and Energetics in the d-ALa:d-Lac Ligase VanA
N Duclert-Savatier, G Bouvier, M Nilges, TE Malliavin
Journal of chemical information and modeling 56 (9), 1762-1775, 2016
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