Mohamed Elati
Mohamed Elati
Professor of Machine Learning & Computational systems biology at University of Lille
Verified email at univ-lille.fr - Homepage
Title
Cited by
Cited by
Year
LICORN: learning cooperative regulation networks from gene expression data
M Elati, P Neuvial, M Bolotin-Fukuhara, E Barillot, F Radvanyi, ...
Bioinformatics 23 (18), 2407-2414, 2007
542007
Evolutionary optimization of convolutional neural networks for cancer miRNA biomarkers classification
A Lopez-Rincon, A Tonda, M Elati, O Schwander, B Piwowarski, ...
Applied Soft Computing 65, 91-100, 2018
412018
Coregnet: reconstruction and integrated analysis of co-regulatory networks
R Nicolle, F Radvanyi, M Elati
Bioinformatics, doi: 10.1093/bioinformatics/btv305, 2015
392015
Differences in gene transcriptomic pattern of Plasmodium falciparum in children with cerebral malaria and asymptomatic carriers
T Almelli, G Nuel, E Bischoff, A Aubouy, M Elati, CW Wang, MA Dillies, ...
PLoS One 9 (12), e114401, 2014
292014
Identification of functional modules based on transcriptional regulation structure
E Birmelé, M Elati, C Rouveirol, C Ambroise
BMC proceedings 2 (4), 1-6, 2008
202008
Unsupervised learning for gene regulation network inference from expression data: a review
M Elati, C Rouveirol
Algorithms in computational molecular biology, 955-978, 2011
172011
Hybrid method inference for the construction of cooperative regulatory network in human
I Chebil, R Nicolle, G Santini, C Rouveirol, M Elati
IEEE transactions on nanobioscience 13 (2), 97-103, 2014
152014
On Ziv's rounding test
F De Dinechin, C Lauter, JM Muller, S Torres
ACM Transactions on Mathematical Software (TOMS) 39 (4), 1-19, 2013
152013
Integrating transcriptional activity in genome-scale models of metabolism
DT Banos, P Trébulle, M Elati
BMC systems biology 11 (7), 81-90, 2017
132017
PreCisIon: PREdiction of CIS-regulatory elements improved by gene’s positION
M Elati, R Nicolle, I Junier, D Fernández, R Fekih, J Font, F Képès
Nucleic acids research 41 (3), 1406-1415, 2013
122013
Inference and interrogation of a coregulatory network in the context of lipid accumulation in Yarrowia lipolytica
P Trébulle, JM Nicaud, C Leplat, M Elati
NPJ systems biology and applications 3 (1), 1-8, 2017
112017
Pepper: cytoscape app for protein complex expansion using protein–protein interaction networks
C Winterhalter, R Nicolle, A Louis, C To, F Radvanyi, M Elati
Bioinformatics 30 (23), 3419-3420, 2014
102014
Network transformation of gene expression for feature extraction
R Nicolle, M Elati, F Radvanyi
2012 11th International Conference on Machine Learning and Applications 1 …, 2012
102012
A parallel genetic programming for single class classification
C To, M Elati
Proceedings of the 15th annual conference companion on Genetic and …, 2013
92013
Evolutionary mining of skyline clusters of attributed graph data
W Dhifli, NEI Karabadji, M Elati
Information Sciences 509, 501-514, 2020
82020
GREAT: a web portal for Genome Regulatory Architecture Tools
C Bouyioukos, F Bucchini, M Elati, F Képès
Nucleic acids research 44 (W1), W77-W82, 2016
62016
A model for gene deregulation detection using expression data
T Picchetti, J Chiquet, M Elati, P Neuvial, R Nicolle, E Birmelé
BMC systems biology 9 (6), 1-8, 2015
62015
Identification of putative master regulators in rheumatoid arthritis synovial fibroblasts using gene expression data and network inference
N Zerrouk, Q Miagoux, A Dispot, M Elati, A Niarakis
Scientific reports 10 (1), 1-13, 2020
42020
Boosting binding sites prediction using gene’s positions
M Elati, R Fekih, R Nicolle, I Junier, J Hérisson, F Képès
International Workshop on Algorithms in Bioinformatics, 92-103, 2011
42011
Metabolic syndrome, malnutrition, and its associations with cardiovascular and all-cause mortality in hemodialysis patients: Follow-up for three years
Z El Ati, H Machfar, H Boussafa, N Ati, OBO Sioud, B Zantour, H Bouzidi, ...
Saudi Journal of Kidney Diseases and Transplantation 31 (1), 129, 2020
32020
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