Suivre
Dmitry Svetlichnyy
Dmitry Svetlichnyy
Centre for Strategic Planning
Adresse e-mail validée de cspfmba.ru
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iRegulon: from a gene list to a gene regulatory network using large motif and track collections
R Janky, A Verfaillie, H Imrichová, B Van de Sande, L Standaert, ...
PLoS computational biology 10 (7), e1003731, 2014
7842014
Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state
A Verfaillie, H Imrichova, ZK Atak, M Dewaele, F Rambow, G Hulselmans, ...
Nature communications 6 (1), 6683, 2015
4122015
Coupled scRNA-seq and intracellular protein activity reveal an immunosuppressive role of TREM2 in cancer
Y Katzenelenbogen, F Sheban, A Yalin, I Yofe, D Svetlichnyy, DA Jaitin, ...
Cell 182 (4), 872-885. e19, 2020
3262020
Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic
A Verfaillie, D Svetlichnyy, H Imrichova, K Davie, M Fiers, ZK Atak, ...
Genome research 26 (7), 882-895, 2016
772016
Identification of High-Impact cis-Regulatory Mutations Using Transcription Factor Specific Random Forest Models
D Svetlichnyy, H Imrichova, M Fiers, Z Kalender Atak, S Aerts
PLoS computational biology 11 (11), e1004590, 2015
282015
Systems pharmacology models can be used to understand complex pharmacokinetic‐pharmacodynamic behavior: an example using 5‐lipoxygenase inhibitors
O Demin, T Karelina, D Svetlichniy, E Metelkin, G Speshilov, O Demin Jr, ...
CPT: Pharmacometrics & Systems Pharmacology 2 (9), 1-9, 2013
262013
Identification of cis-regulatory mutations generating de novo edges in personalized cancer gene regulatory networks
Z Kalender Atak, H Imrichova, D Svetlichnyy, G Hulselmans, V Christiaens, ...
Genome Medicine 9, 1-13, 2017
162017
Regulation of leukotriene and 5oxoETE synthesis and the effect of 5-lipoxygenase inhibitors: a mathematical modeling approach
TA Karelina, KV Zhudenkov, OO Demin, DV Svetlichny, B Agoram, ...
BMC systems biology 6, 1-14, 2012
102012
ACE-inhibition induces a cardioprotective transcriptional response in the metabolic syndrome heart
PCPH Aziza Yakubova, Lieven Thorrez, Dmitry Svetlichnyy, Liesbeth Zwarts ...
Scientific reports, 2018
92018
Single-Cell Gene Expression Analysis Revealed Immune Cell Signatures of Delta COVID-19
AM Shaymardanov, OA Antonova, AD Sokol, KA Deinichenko, ...
Cells 11 (19), 2950, 2022
12022
Single-Cell Gene Expression Analysis Revealed Immune Cell Signatures of Delta COVID-19. Cells 2022, 11, 2950
AM Shaymardanov, OA Antonova, AD Sokol, KA Deinichenko, ...
s Note: MDPI stays neutral with regard to jurisdictional claims in published …, 2022
2022
Diminished preconditioning potential in the hearts from metabolic syndrome subjects can be partially restored by angiotensin-converting-enzyme inhibitor therapy
A Yakubova, L Thorrez, D Svetlichnyy, G Van Der Mieren, W Oosterlinck, ...
European Heart Journal 39, 1363-1363, 2018
2018
P6446 Diminished preconditioning potential in the hearts from metabolic syndrome subjects can be partially restored by angiotensin-converting-enzyme inhibitor therapy
A Yakubova, L Thorrez, D Svetlichnyy, G Van Der Mieren, W Oosterlinck, ...
European Heart Journal 39 (suppl_1), ehy566. P6446, 2018
2018
Approaches to building spatio-temporal models of splicing regulation that include RNA structure
D Svetlichnyy, D Pervouchine
Moscow Conference on Computational Molecular Biology (MCCMB 2017), 72-72, 2017
2017
IDENTIFICATION OF CIS-REGULATORY MODULES AND NON-CODING VARIATION USING MACHINE LEARNING METHODS
D Svetlichnyy
2016
Directly linking non-coding SNPs to changes in epithelial enhancer activity
J Jacobs, I Taskiran, G Paciello
EMBL Transcription and Chromatin Proceedings, 2016
2016
ESTIMATING THE IMPACT OF CIS-REGULATORY VARIATION IN CANCER GENOMES USING ENHANCER PREDICTION MODELS AND MATCHED GENOME-EPIGENOME-TRANSCRIPTOME DATA
D Svetlichnyy, I Hana, KA Zeynep, S Aerts
10th Benelux Bioinformatics Conference, Location: Antwerp, Belgium, 2015
2015
A novel High-throughput Enhancer reporter assay reveals unsophisticated p53 enhancer logic
A Verfaillie, K Davie, D Svetlichnyy, M Fiers, S Aerts
Functional Genomics and Systems Biology, Date: 2015/10/28-2015/10/30 …, 2015
2015
Estimating the impact of cis-regulatory variation in cancer genomes using enhancer prediction models and matched genome-epigenome-transcriptome data
H Imrichova, Z Kalender Atak, D Svetlichnyy, J Reumers, H Ceulemans, ...
Functional Genomics and Systems Biology: From Model Organisms to Human …, 2015
2015
Melanoma transcriptome and chromatin profiling identifies a proliferative SOX10/MITF gene network and an AP-1/TEADs invasive network
H Imrichova, A Verfaillie, Z Kalender Atak, C Herrmann, G Hulselmans, ...
EMBO Conference:, 2014
2014
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