Adam M. Szalkowski
Adam M. Szalkowski
PhD student, ETH Zürich
Adresse e-mail validée de inf.ethz.ch
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GrGen: A fast SPO-based graph rewriting tool
R Geiß, GV Batz, D Grund, S Hack, A Szalkowski
International Conference on Graph Transformation, 383-397, 2006
2382006
SWPS3–fast multi-threaded vectorized Smith-Waterman for IBM Cell/BE and× 86/SSE2
A Szalkowski, C Ledergerber, P Krähenbühl, C Dessimoz
BMC research notes 1 (1), 1-4, 2008
1452008
Rapid innovation in ChIP-seq peak-calling algorithms is outdistancing benchmarking efforts
AM Szalkowski, CD Schmid
Briefings in bioinformatics 12 (6), 626-633, 2011
682011
Markov models of amino acid substitution to study proteins with intrinsically disordered regions
AM Szalkowski, M Anisimova
PloS one 6 (5), e20488, 2011
332011
Graph-based modeling of tandem repeats improves global multiple sequence alignment
AM Szalkowski, M Anisimova
Nucleic acids research 41 (17), e162-e162, 2013
272013
Fast and robust multiple sequence alignment with phylogeny-aware gap placement
AM Szalkowski
BMC bioinformatics 13 (1), 1-11, 2012
182012
Alignment of genomic sequences with intrinsic disorder and tandem repeats
AM Szalkowski
ETH Zurich, 2013
2013
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