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Ruidong Li
Ruidong Li
Senior Bioinformatics Scientist @ Gilead Sciences, Inc.
Verified email at gilead.com - Homepage
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Year
GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA, and mRNA data in GDC
R Li, H Qu, S Wang, J Wei, L Zhang, R Ma, J Lu, J Zhu, WD Zhong, Z Jia
Bioinformatics, 2018
1732018
Hybrid breeding of rice via genomic selection
Y Cui*, R Li*, G Li*, F Zhang, T Zhu, Q Zhang, J Ali, Z Li, S Xu
Plant biotechnology journal 18 (1), 57-67, 2020
1122020
Influenza A virus preferentially snatches noncoding RNA caps
W Gu, GR Gallagher, W Dai, P Liu, R Li, MI Trombly, DB Gammon, ...
Rna 21 (12), 2067-2075, 2015
892015
CancerMIRNome: an interactive analysis and visualization database for miRNome profiles of human cancer
R Li, H Qu, S Wang, JM Chater, X Wang, Y Cui, L Yu, R Zhou, Q Jia, ...
Nucleic Acids Research, 2021
562021
YTHDF2 binds to 5-methylcytosine in RNA and modulates the maturation of ribosomal RNA
X Dai, G Gonzalez, L Li, J Li, C You, W Miao, J Hu, L Fu, Y Zhao, R Li, L Li, ...
Analytical chemistry 92 (1), 1346-1354, 2019
542019
Identification of optimal prediction models using multi-omic data for selecting hybrid rice
S Wang, J Wei, R Li, H Qu, JM Chater, R Ma, Y Li, W Xie, Z Jia
Heredity 123 (3), 395-406, 2019
472019
Key metabolic enzymes involved in remdesivir activation in human lung cells
R Li, A Liclican, Y Xu, J Pitts, C Niu, J Zhang, C Kim, X Zhao, D Soohoo, ...
Antimicrobial agents and chemotherapy 65 (9), 10.1128/aac. 00602-21, 2021
402021
Integrated bioinformatic analysis reveals YWHAB as a novel diagnostic biomarker for idiopathic pulmonary arterial hypertension
T Wang, X Zheng, R Li, X Liu, J Wu, X Zhong, W Zhang, Y Liu, X He, W Liu, ...
Journal of Cellular Physiology, 2018
372018
IRGS: an immune-related gene classifier for lung adenocarcinoma prognosis
X Shi*, R Li*, X Dong, AM Chen, X Liu, D Lu, S Feng, H Wang, K Cai
Journal of translational medicine 18 (1), 1-11, 2020
312020
Multimodal analysis of gene expression from postmortem brains and blood identifies synaptic vesicle trafficking genes to be associated with Parkinson’s disease
X Gao*, Z Huang*, C Feng*, C Guan*, R Li*, H Xie*, J Chen, M Li, R Que, ...
Briefings in Bioinformatics, 2020
302020
Metabolome-wide association studies for agronomic traits of rice
J Wei, A Wang, R Li, H Qu, Z Jia
Heredity 120 (4), 342-355, 2018
302018
Autophagy induced by overexpression of DCTPP1 promotes tumor progression and predicts poor clinical outcome in prostate cancer
J Lu, W Dong, H He, Z Han, YJ Zhuo, RJ Mo, Y Liang, JG Zhu, R Li, H Qu, ...
International journal of biological macromolecules 118, 599-609, 2018
272018
The chromatin-remodeling protein BAF60/SWP73A regulates the plant immune receptor NLRs
CY Huang, DS Rangel, X Qin, C Bui, R Li, Z Jia, X Cui, H Jin
Cell host & microbe 29 (3), 425-434. e4, 2021
212021
Comprehensive evaluation of machine learning models and gene expression signatures for prostate cancer prognosis using large population cohorts
R Li, J Zhu, WD Zhong, Z Jia
Cancer Research 82 (9), 1832-1843, 2022
182022
Identification of positive and negative regulators of antiviral RNA interference in Arabidopsis thaliana
S Liu, M Chen, R Li, WX Li, A Gal-On, Z Jia, SW Ding
Nature communications 13 (1), 2994, 2022
152022
Extended application of genomic selection to screen multiomics data for prognostic signatures of prostate cancer
R Li, S Wang, Y Cui, H Qu, JM Chater, L Zhang, J Wei, M Wang, Y Xu, ...
Briefings in Bioinformatics, 2021
152021
Identification of four potential biomarkers associated with coronary artery disease in non-diabetic patients by gene co-expression network analysis
M Jiao, J Li, Q Zhang, X Xu, R Li, P Dong, C Meng, Y Li, L Wang, W Qi, ...
Frontiers in Genetics 11, 542, 2020
152020
PCaDB - a comprehensive and interactive database for transcriptomes from prostate cancer population cohorts
R Li, J Zhu, WD Zhong, Z Jia
bioRxiv, 2021
132021
Boosting predictabilities of agronomic traits in rice using bivariate genomic selection
S Wang, Y Xu, H Qu, Y Cui, R Li, JM Chater, L Yu, R Zhou, R Ma, ...
Briefings in Bioinformatics 22 (3), bbaa103, 2021
112021
Potentially critical Roles of NDUFB5, TIMMDC1, and VDAC3 in the progression of septic cardiomyopathy through integrated bioinformatics analysis
K Kang*, J Li*, R Li*, X Xu, J Liu, L Qin, T Huang, J Wu, M Jiao, M Wei, ...
DNA and cell biology 39 (1), 105-117, 2020
112020
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