Peter Otoupal

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Anushree ChatterjeeSachi Bio and ARC LabsAdresse e-mail validée de sachibio.com
John M GladdenSandia National LaboratoriesAdresse e-mail validée de lbl.gov
Keesha EricksonEventbriteAdresse e-mail validée de eventbrite.com
Hal AlperProfessor, Chemical Engineering, The University of Texas at AustinAdresse e-mail validée de che.utexas.edu
Leqian LiuBerkeley LightsAdresse e-mail validée de berkeleylights.com
John BlazeckGeorgia Tech - School of Chemical and Biomolecular EngineeringAdresse e-mail validée de chbe.gatech.edu
Jon MagnusonStaff Chemist, Team Leader, Pacific Northwest National LaboratoryAdresse e-mail validée de pnnl.gov
Blake A. SimmonsLawrence Berkeley National LaboratoryAdresse e-mail validée de lbl.gov
Kristen A. EllerUniversity of Colorado BoulderAdresse e-mail validée de colorado.edu
Colleen CourtneyUniversity of Colorado BoulderAdresse e-mail validée de colorado.edu
Gina GeiselmanSenior R&D Laboratory Support Technologist, Sandia National LaboratoriesAdresse e-mail validée de sandia.gov
Adam Paul ArkinDepartment of Bioengineering, University of California, Berkeley, Physical Biosciences Division, E.OAdresse e-mail validée de lbl.gov
Jeffrey SkerkerAssociate Researcher, University of California, BerkeleyAdresse e-mail validée de berkeley.edu
Carolina Araujo BarcelosAdresse e-mail validée de lbl.gov
Eric SundstromLawrence Berkeley National LabAdresse e-mail validée de lbl.gov
Prashant NagpalSachi BioworksAdresse e-mail validée de sachibio.com
Lee E. KorshojUniversity of Nebraska Medical CenterAdresse e-mail validée de unmc.edu
Aindrila MukhopadhyayLawrence Berkeley National LaboratoryAdresse e-mail validée de lbl.gov
Alberto RodriguezSandia National Laboratories / Joint BioEnergy InstituteAdresse e-mail validée de lbl.gov
Jennifer DoudnaProfessor of Molecular and Cell Biology and Chemistry, UC BerkeleyAdresse e-mail validée de berkeley.edu

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Peter Otoupal

Scientist II, Spotlight Therapeutics

Adresse e-mail validée de Colorado.EDU

Gene Editing Synthetic Biology


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
Harnessing Yarrowia lipolytica lipogenesis to create a platform for lipid and biofuel production J Blazeck, A Hill, L Liu, R Knight, J Miller, A Pan, P Otoupal, HS Alper Nature communications 5 (1), 3131, 2014	572	2014
Surveying the lipogenesis landscape in Yarrowia lipolytica through understanding the function of a Mga2p regulatory protein mutant L Liu, K Markham, J Blazeck, N Zhou, D Leon, P Otoupal, HS Alper Metabolic engineering 31, 102-111, 2015	72	2015
Increasing expression level and copy number of a Yarrowia lipolytica plasmid through regulated centromere function L Liu, P Otoupal, A Pan, HS Alper FEMS yeast research 14 (7), 1124-1127, 2014	57	2014
Multiplexed CRISPR-Cas9-Based Genome Editing of Rhodosporidium toruloides PB Otoupal, M Ito, AP Arkin, JK Magnuson, JM Gladden, JM Skerker Msphere 4 (2), 10.1128/msphere. 00099-19, 2019	54	2019
Transcriptome-level signatures in gene expression and gene expression variability during bacterial adaptive evolution KE Erickson, PB Otoupal, A Chatterjee Msphere 2 (1), 10.1128/msphere. 00009-17, 2017	36	2017
Gene expression variability underlies adaptive resistance in phenotypically heterogeneous bacterial populations KE Erickson, PB Otoupal, A Chatterjee ACS Infectious Diseases 1 (11), 555-567, 2015	32	2015
CRISPR perturbation of gene expression alters bacterial fitness under stress and reveals underlying epistatic constraints PB Otoupal, KE Erickson, A Escalas-Bordoy, A Chatterjee ACS synthetic biology 6 (1), 94-107, 2017	31	2017
Decaffeination and Measurement of Caffeine Content by Addicted Escherichia coli with a Refactored N-Demethylation Operon from Pseudomonas putida CBB5 EM Quandt, MJ Hammerling, RM Summers, PB Otoupal, B Slater, ... ACS synthetic biology 2 (6), 301-307, 2013	31	2013
Facile accelerated specific therapeutic (FAST) platform develops antisense therapies to counter multidrug-resistant bacteria KA Eller, TR Aunins, CM Courtney, JK Campos, PB Otoupal, KE Erickson, ... Communications biology 4 (1), 331, 2021	23	2021
Conversion of poplar biomass into high-energy density tricyclic sesquiterpene jet fuel blendstocks GM Geiselman, J Kirby, A Landera, P Otoupal, G Papa, C Barcelos, ... Microbial cell factories 19, 1-16, 2020	20	2020
CRISPR-RNAa: targeted activation of translation using dCas13 fusions to translation initiation factors PB Otoupal, BF Cress, JA Doudna, JS Schoeniger Nucleic acids research 50 (15), 8986-8998, 2022	19	2022
CRISPR gene perturbations provide insights for improving bacterial biofuel tolerance PB Otoupal, A Chatterjee Frontiers in bioengineering and biotechnology 6, 122, 2018	19	2018
Multiplexed deactivated CRISPR-Cas9 gene expression perturbations deter bacterial adaptation by inducing negative epistasis PB Otoupal, WT Cordell, V Bachu, MJ Sitton, A Chatterjee Communications Biology 1 (1), 129, 2018	14	2018
High‐Throughput Block Optical DNA Sequence Identification DM Sagar, LE Korshoj, KB Hanson, PP Chowdhury, PB Otoupal, ... Small 14 (4), 1703165, 2018	14	2018
Potentiating antibiotic efficacy via perturbation of non-essential gene expression PB Otoupal, KA Eller, KE Erickson, J Campos, TR Aunins, A Chatterjee Communications Biology 4 (1), 1267, 2021	13	2021
Bioconversion of cellulose into bisabolene using Ruminococcus flavefaciens and Rhodosporidium toruloides LE Walls, P Otoupal, R Ledesma-Amaro, SB Velasquez-Orta, JM Gladden, ... Bioresource Technology 368, 128216, 2023	12	2023
Nucleotide and structural label identification in single RNA molecules with quantum tunneling spectroscopy GR Abel, LE Korshoj, PB Otoupal, S Khan, A Chatterjee, P Nagpal Chemical Science 10 (4), 1052-1063, 2019	11	2019
Alkanolamines as dual functional solvents for biomass deconstruction and bioenergy production EC Achinivu, S Frank, NR Baral, L Das, M Mohan, P Otoupal, E Shabir, ... Green Chemistry 23 (21), 8611-8631, 2021	7	2021
Engineering Rhodosporidium toruloides for production of 3-hydroxypropionic acid from lignocellulosic hydrolysate D Liu, HJ Hwang, PB Otoupal, GM Geiselman, J Kim, KR Pomraning, ... Metabolic Engineering 78, 72-83, 2023	6	2023
Design of a de novo aggregating antimicrobial peptide and a bacterial conjugation-based delivery system LT Collins, PB Otoupal, JK Campos, CM Courtney, A Chatterjee Biochemistry 58 (11), 1521-1526, 2018	6	2018

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