Alex H Wagner, PhD
Alex H Wagner, PhD
NHGRI K99 Scholar, Assistant Professor at Nationwide Children's Hospital and Ohio State University
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DGIdb 3.0: a redesign and expansion of the drug–gene interaction database
KC Cotto, AH Wagner, YY Feng, S Kiwala, AC Coffman, G Spies, ...
Nucleic acids research 46 (D1), D1068-D1073, 2018
CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer
M Griffith, NC Spies, K Krysiak, JF McMichael, AC Coffman, AM Danos, ...
Nature genetics 49 (2), 170-174, 2017
DGIdb 2.0: mining clinically relevant drug–gene interactions
AH Wagner, AC Coffman, BJ Ainscough, NC Spies, ZL Skidmore, ...
Nucleic acids research 44 (D1), D1036-D1044, 2016
Non-exomic and synonymous variants in ABCA4 are an important cause of Stargardt disease
TA Braun, RF Mullins, AH Wagner, JL Andorf, RM Johnston, BB Bakall, ...
Human molecular genetics 22 (25), 5136-5145, 2013
GenVisR: genomic visualizations in R
ZL Skidmore, AH Wagner, R Lesurf, KM Campbell, J Kunisaki, OL Griffith, ...
Bioinformatics 32 (19), 3012-3014, 2016
Exon-level expression profiling of ocular tissues
AH Wagner, VN Anand, WH Wang, JE Chatterton, D Sun, AR Shepard, ...
Experimental eye research 111, 105-111, 2013
Transcriptomic analysis across nasal, temporal, and macular regions of human neural retina and RPE/choroid by RNA-Seq
SS Whitmore, AH Wagner, AP DeLuca, AV Drack, EM Stone, BA Tucker, ...
Experimental eye research 129, 93-106, 2014
DoCM: a database of curated mutations in cancer
BJ Ainscough, M Griffith, AC Coffman, AH Wagner, J Kunisaki, ...
Nature methods 13 (10), 806-807, 2016
Recurrent WNT pathway alterations are frequent in relapsed small cell lung cancer
AH Wagner, S Devarakonda, ZL Skidmore, K Krysiak, A Ramu, L Trani, ...
Nature communications 9 (1), 1-11, 2018
Standard operating procedure for somatic variant refinement of sequencing data with paired tumor and normal samples
EK Barnell, P Ronning, KM Campbell, K Krysiak, BJ Ainscough, LM Sheta, ...
Genetics in Medicine 21 (4), 972-981, 2019
A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer
AH Wagner, B Walsh, G Mayfield, D Tamborero, D Sonkin, K Krysiak, ...
Nature genetics 52 (4), 448-457, 2020
Comprehensive genomic analysis reveals FLT3 activation and a therapeutic strategy for a patient with relapsed adult B-lymphoblastic leukemia
M Griffith, OL Griffith, K Krysiak, ZL Skidmore, MJ Christopher, JM Klco, ...
Experimental hematology 44 (7), 603-613, 2016
Optic nerve crush induces spatial and temporal gene expression patterns in retina and optic nerve of BALB/cJ mice
TP Sharma, CM McDowell, Y Liu, AH Wagner, D Thole, BP Faga, ...
Molecular neurodegeneration 9 (1), 1-19, 2014
A deep learning approach to automate refinement of somatic variant calling from cancer sequencing data
BJ Ainscough, EK Barnell, P Ronning, KM Campbell, AH Wagner, ...
Nature genetics 50 (12), 1735-1743, 2018
Prioritization of retinal disease genes: an integrative approach
AH Wagner, KR Taylor, AP DeLuca, TL Casavant, RF Mullins, EM Stone, ...
Human mutation 34 (6), 853-859, 2013
Adapting crowdsourced clinical cancer curation in CIViC to the ClinGen minimum variant level data community‐driven standards
AM Danos, DI Ritter, AH Wagner, K Krysiak, D Sonkin, C Micheel, ...
Human mutation 39 (11), 1721-1732, 2018
Collaborative, multidisciplinary evaluation of cancer variants through virtual molecular tumor boards informs local clinical practices
S Rao, B Pitel, AH Wagner, SM Boca, M McCoy, I King, S Gupta, BH Park, ...
JCO clinical cancer informatics 4, 602-613, 2020
Whole‐gene sequencing investigation of SAT1 in attempted suicide
ET Monson, K de Klerk, SC Gaynor, AH Wagner, ME Breen, M Parsons, ...
American Journal of Medical Genetics Part B: Neuropsychiatric Genetics 171 …, 2016
CRISPR/Cas with ribonucleoprotein complexes and transiently selected telomere vectors allows highly efficient marker-free and multiple genome editing in Botrytis cinerea
T Leisen, F Bietz, J Werner, A Wegner, U Schaffrath, D Scheuring, ...
PLoS pathogens 16 (8), e1008326, 2020
FHIR Genomics: enabling standardization for precision medicine use cases
G Alterovitz, B Heale, J Jones, D Kreda, F Lin, L Liu, X Liu, KD Mandl, ...
NPJ genomic medicine 5 (1), 1-4, 2020
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