The RESOLUTE consortium: unlocking SLC transporters for drug discovery G Superti-Furga, D Lackner, T Wiedmer, A Ingles-Prieto, B Barbosa, ... Nature reviews Drug discovery 19 (7), 429-430, 2020 | 79 | 2020 |
The duplicated genes database: identification and functional annotation of co-localised duplicated genes across genomes M Ouedraogo, C Bettembourg, A Bretaudeau, O Sallou, C Diot, ... PloS one 7 (11), e50653, 2012 | 65 | 2012 |
Semantic particularity measure for functional characterization of gene sets using gene ontology C Bettembourg, C Diot, O Dameron PloS one 9 (1), e86525, 2014 | 20 | 2014 |
Optimal threshold determination for interpreting semantic similarity and particularity: application to the comparison of gene sets and metabolic pathways using GO and ChEBI C Bettembourg, C Diot, O Dameron PloS one 10 (7), e0133579, 2015 | 17 | 2015 |
Measuring the evolution of ontology complexity: the gene ontology case study O Dameron, C Bettembourg, N Le Meur PLoS One 8 (10), e75993, 2013 | 17 | 2013 |
GO2PUB: Querying PubMed with semantic expansion of gene ontology terms C Bettembourg, C Diot, A Burgun, O Dameron Journal of biomedical semantics 3, 1-12, 2012 | 17 | 2012 |
ABHD11, a new diacylglycerol lipase involved in weight gain regulation J Escoubet, M Kenigsberg, M Derock, V Yaligara, MD Bock, S Roche, ... PLoS One 15 (6), e0234780, 2020 | 7 | 2020 |
AskOmics: Intégration et interrogation de réseaux de régulation génomique et post-génomique C Bettembourg, O Dameron, A Bretaudeau, F Legeai IN OVIVE (INtégration de sources/masses de données hétérogènes et Ontologies …, 2015 | 4 | 2015 |
A2Sign: Agnostic Algorithms for Signatures—a universal method for identifying molecular signatures from transcriptomic datasets prior to cell-type deconvolution G Boldina, P Fogel, C Rocher, C Bettembourg, G Luta, F Augé Bioinformatics 38 (4), 1015-1021, 2022 | 1 | 2022 |
Quantitative cross-species comparison of GO annotations: advantages and limitations of semantic similarity measure O Dameron, C Bettembourg, L Joret INSERM U936, France, 2010 | 1 | 2010 |
ASigNTF: Agnostic Signature using NTF–a universal agnostic strategy to estimate cell-types abundance from transcriptomic datasets P Fogel, G Boldina, C Rocher, C Bettembourg, G Luta, F Augé bioRxiv, 2021.02. 04.429589, 2021 | | 2021 |
Identification of causal signature using omics data integration and network reasoning-based analysis M Wery, E Becker, F Auge, C Bettembourg, O Dameron, A Siegel JOBIM 2019-Journées Ouvertes Biologie, Informatique et Mathématiques, 1, 2019 | | 2019 |
Comparative genomic analysis of Clubroot resistance in the Brassicaceae family A Evrard, C Bettembourg, O Dameron, O Filangi, A Bretaudeau, ... Brassica2016, 2016 | | 2016 |
BIPAA/Askomics, a new and easy approach for querying genomics and epigenomics elements in interaction F Legeai, C Bettembourg, A Bretaudeau, Y Chaussin, O Dameron, ... XXVth International Congress of Entomology 2016, 2016 | | 2016 |
Integration and query of biological datasets with Semantic Web technologies: AskOmics A Evrard, C Bettembourg, M Jubault, O Dameron, O Filangi, A Bretaudeau, ... Journées Ouvertes Biologie, Informatique et Mathématiques (JOBIM 2016), 2016 | | 2016 |
Méthodes sémantiques pour la comparaison inter-espèces de voies métaboliques: application au métabolisme des lipides chez l'humain, la souris et la poule C Bettembourg Université Rennes 1, 2013 | | 2013 |
GO2PUB C Bettembourg, O Dameron, C Diot, A Burgun | | 2012 |
Comparaison inter-espèces de voies métaboliques par mesure de similarité sémantique C Bettembourg, O Dameron, A Burgun, C Diot Ecole chercheurs en Biologie Intégrative et Génomique dans le Grand Ouest …, 2011 | | 2011 |
Cross-Species Metabolic Pathways Comparison–Focus on Mouse, Human and Chicken Lipid Metabolism C Bettembourg, C Diot, O Dameron BMC Bioinformatics 11 (449), 2010 | | 2010 |
Cross-species metabolic pathways comparison C Bettembourg, O Dameron, C Diot | | |