| Cell fate decision as high-dimensional critical state transition M Mojtahedi, A Skupin, J Zhou, IG Castaño, RYY Leong-Quong, H Chang, ... PLoS biology 14 (12), e2000640, 2016 | 350 | 2016 |
| Non-Darwinian dynamics in therapy-induced cancer drug resistance AO Pisco, A Brock, J Zhou, A Moor, M Mojtahedi, D Jackson, S Huang Nature communications 4 (1), 2467, 2013 | 335 | 2013 |
| Quasi-potential landscape in complex multi-stable systems JX Zhou, E Aliyu, M. D. S.: Aurell, S Huang Journal of the royal society interface 9 (77), 3539-3553, 2012 | 260 | 2012 |
| A CD4+ T cell population expanded in lupus blood provides B cell help through interleukin-10 and succinate S Caielli, DT Veiga, P Balasubramanian, S Athale, B Domic, E Murat, ... Nature medicine 25 (1), 75-81, 2019 | 244 | 2019 |
| Understanding gene circuits at cell-fate branch points for rational cell reprogramming JX Zhou, S Huang Trends in genetics 27 (2), 55-62, 2011 | 198 | 2011 |
| Practical guidance for the evaluation and management of drug hypersensitivity: specific drugs AD Broyles, A Banerji, S Barmettler, CM Biggs, K Blumenthal, PJ Brennan, ... The Journal of Allergy and Clinical Immunology: In Practice 8 (9), S16-S116, 2020 | 179 | 2020 |
| Cellular network entropy as the energy potential in Waddington's differentiation landscape CRS Banerji, D Miranda-Saavedra, S Severini, M Widschwendter, ... Scientific reports 3 (1), 3039, 2013 | 160 | 2013 |
| Gene-pair expression signatures reveal lineage control M Heinäniemi, M Nykter, R Kramer, A Wienecke-Baldacchino, ... Nature methods 10 (6), 577-583, 2013 | 148 | 2013 |
| TGFβ-blockade uncovers stromal plasticity in tumors by revealing the existence of a subset of interferon-licensed fibroblasts AL Grauel, B Nguyen, D Ruddy, T Laszewski, S Schwartz, J Chang, ... Nature communications 11 (1), 6315, 2020 | 140 | 2020 |
| Cell population structure prior to bifurcation predicts efficiency of directed differentiation in human induced pluripotent cells R Bargaje, K Trachana, MN Shelton, CS McGinnis, JX Zhou, C Chadick, ... Proceedings of the National Academy of Sciences 114 (9), 2271-2276, 2017 | 93 | 2017 |
| Predicting pancreas cell fate decisions and reprogramming with a hierarchical multi-attractor model JX Zhou, L Brusch, S Huang PloS one 6 (3), e14752, 2011 | 90 | 2011 |
| Extracting Intercellular Signaling Network Of Cancer Tissues Using Ligand-Receptor Expression Patterns From Whole-Tumor And Single-Cell Transcriptomes JX Zhou, R Taramelli, E Pedrini, T Knijnenburg, S Huang Scientific Reports 7 (10.1038/s41598-017-09307-w), 8815, 2017 | 86 | 2017 |
| Nonequilibrium population dynamics of phenotype conversion of cancer cells JX Zhou, AO Pisco, H Qian, S Huang PloS one 9 (12), e110714, 2014 | 65 | 2014 |
| Determining relative dynamic stability of cell states using boolean network model JI Joo, JX Zhou, S Huang, KH Cho Scientific reports 8 (1), 12077, 2018 | 55 | 2018 |
| Relative stability of network states in Boolean network models of gene regulation in development JX Zhou, A Samal, AF d’Hérouël, ND Price, S Huang Biosystems 142, 15-24, 2016 | 52 | 2016 |
| Single-cell gene expression profiling and cell state dynamics: collecting data, correlating data points and connecting the dots SH Carsten Marr, Joseph X Zhou Current Opinion in Biotechnology 39, 207-214, 2016 | 43 | 2016 |
| On the role of lateral stabilization during early patterning in the pancreas W de Back, JX Zhou, L Brusch Journal of The Royal Society Interface 10 (79), 20120766, 2013 | 41 | 2013 |
| Processes on the emergent landscapes of biochemical reaction networks and heterogeneous cell population dynamics: differentiation in living matters S Huang, F Li, JX Zhou, H Qian Journal of the Royal Society Interface 14 (130), 20170097, 2017 | 34 | 2017 |
| Phylostratigraphic analysis of tumor and developmental transcriptomes reveals relationship between oncogenesis, phylogenesis and ontogenesis JX Zhou, L Cisneros, T Knijnenburg, K Trachana, P Davies, S Huang Convergent Science Physical Oncology 4 (2), 025002, 2018 | 26 | 2018 |
| A model for the intrinsic limit of cancer therapy: Duality of treatment-induced cell death and treatment-induced stemness E Angelini, Y Wang, JX Zhou, H Qian, S Huang PLOS Computational Biology 18 (7), e1010319, 2022 | 21 | 2022 |
Sui HuangProfessorVerified email at systemsbiology.org
