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Mark Davids
Mark Davids
Researcher @ AMC
Verified email at amc.uva.nl
Title
Cited by
Cited by
Year
Genome-Scale Model and Omics Analysis of Metabolic Capacities of Akkermansia muciniphila Reveal a Preferential Mucin-Degrading Lifestyle
N Ottman, M Davids, M Suarez-Diez, S Boeren, PJ Schaap, ...
Applied and environmental microbiology 83 (18), e01014-17, 2017
1942017
A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets
MM Leimena, J Ramiro-Garcia, M Davids, B van den Bogert, H Smidt, ...
BMC genomics 14, 1-14, 2013
1282013
Adaptation of Akkermansia muciniphila to the oxic-anoxic interface of the mucus layer
JP Ouwerkerk, KCH van der Ark, M Davids, NJ Claassens, TR Finestra, ...
Applied and environmental microbiology 82 (23), 6983-6993, 2016
1192016
Donor fecal microbiota transplantation ameliorates intestinal graft-versus-host disease in allogeneic hematopoietic cell transplant recipients
YF van Lier, M Davids, NJE Haverkate, PF de Groot, ML Donker, E Meijer, ...
Science translational medicine 12 (556), eaaz8926, 2020
1182020
Weight gain after fecal microbiota transplantation in a patient with recurrent underweight following clinical recovery from anorexia nervosa
NC de Clercq, MN Frissen, M Davids, AK Groen, M Nieuwdorp
Psychotherapy and psychosomatics 88 (1), 58-60, 2019
912019
Microbiome-derived ethanol in nonalcoholic fatty liver disease
AS Meijnikman, M Davids, H Herrema, O Aydin, V Tremaroli, ...
Nature medicine 28 (10), 2100-2106, 2022
772022
The Variable Regions of Lactobacillus rhamnosus Genomes Reveal the Dynamic Evolution of Metabolic and Host-Adaptation Repertoires
C Ceapa, M Davids, J Ritari, J Lambert, M Wels, FP Douillard, T Smokvina, ...
Genome Biology and Evolution 8 (6), 1889-1905, 2016
662016
Oral butyrate does not affect innate immunity and islet autoimmunity in individuals with longstanding type 1 diabetes: a randomised controlled trial
PF de Groot, T Nikolic, S Imangaliyev, S Bekkering, G Duinkerken, ...
Diabetologia 63, 597-610, 2020
652020
Effects of 12-week treatment with dapagliflozin and gliclazide on faecal microbiome: Results of a double-blind randomized trial in patients with type 2 diabetes
EJM van Bommel, H Herrema, M Davids, MHH Kramer, M Nieuwdorp, ...
Diabetes & metabolism 46 (2), 164-168, 2020
502020
Dietary fibre enrichment of supplemental feed modulates the development of the intestinal tract in suckling piglets
HMJ Van Hees, M Davids, D Maes, S Millet, S Possemiers, ...
Journal of animal science and biotechnology 10, 1-11, 2019
422019
Fecal microbiota transplantation from overweight or obese donors in cachectic patients with advanced gastroesophageal cancer: a randomized, double-blind, placebo-controlled …
NC de Clercq, T van den Ende, A Prodan, R Hemke, M Davids, ...
Clinical Cancer Research 27 (13), 3784-3792, 2021
382021
Genome Analysis and Physiological Comparison of Alicycliphilus denitrificans Strains BC and K601T
MJ Oosterkamp, T Veuskens, F Talarico Saia, SAB Weelink, LA Goodwin, ...
PLoS One 8 (6), e66971, 2013
362013
The gut microbiota and depressive symptoms across ethnic groups
JA Bosch, M Nieuwdorp, AH Zwinderman, M Deschasaux, ...
Nature communications 13 (1), 7129, 2022
282022
Liraglutide and sitagliptin have no effect on intestinal microbiota composition: A 12-week randomized placebo-controlled trial in adults with type 2 diabetes
MM Smits, KS Fluitman, H Herrema, M Davids, MHH Kramer, AK Groen, ...
Diabetes & metabolism 47 (5), 101223, 2021
282021
Effects of fecal microbiota transplant on DNA methylation in subjects with metabolic syndrome
EWJ van der Vossen, D Bastos, D Stols-Gonçalves, MC de Goffau, ...
Gut microbes 13 (1), 1993513, 2021
282021
Functional Profiling of Unfamiliar Microbial Communities Using a Validated De Novo Assembly Metatranscriptome Pipeline
M Davids, F Hugenholtz, V Martins dos Santos, H Smidt, M Kleerebezem, ...
PloS one 11 (1), e0146423, 2016
252016
Metatranscriptome analysis of the microbial fermentation of dietary milk proteins in the murine gut
F Hugenholtz, M Davids, J Schwarz, M Müller, D Tomé, P Schaap, ...
Plos one 13 (4), e0194066, 2018
212018
Bacterial and viral respiratory tract microbiota and host characteristics in adults with lower respiratory tract infections: a case-control study
BW Haak, X Brands, M Davids, H Peters-Sengers, RFJ Kullberg, ...
Clinical Infectious Diseases 74 (5), 776-784, 2022
172022
Feasibility of metatranscriptome analysis from infant gut microbiota: adaptation to solid foods results in increased activity of firmicutes at six months
F Hugenholtz, J Ritari, L Nylund, M Davids, R Satokari, WM De Vos
International journal of microbiology 2017, 2017
132017
Compensatory intestinal antibody response against pro-inflammatory microbiota after bariatric surgery
TPM Scheithauer, M Davids, M Winkelmeijer, X Verdoes, Ö Aydin, ...
Gut Microbes 14 (1), 2031696, 2022
122022
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